RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 TMEM245Q9H330 911 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 GDE1Q9NZC3 331 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 INMTO95050 263 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 DLGAP3O95886 979 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 ALPLP05186 524 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 GPR1P46091 355 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 TUBA1BP68363 451 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 ELP6Q0PNE2 266 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 TUBA1AQ71U36 451 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 HID1Q8IV36 788 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 POC5Q8NA72 575 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 NDNFQ8TB73 568 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 GLMNQ92990 594 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 TMEM45AQ9NWC5 275 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 ZNF221Q9UK13 617 aa16.46■□□□□ 0.23
SHKBP1-205ENST00000594973 KCNE1BA0A087WTH5 132 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 PSIP1O75475 530 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 PRSS23O95084 383 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 BCKDHAP12694 445 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 IL7RP16871 459 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 ACVR2AP27037 513 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 NAE1Q13564 534 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 KCNC3Q14003 757 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 PDGFRLQ15198 375 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 ZIK1Q3SY52 487 aaPredicted RBP16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 SPANXN4Q5MJ08 99 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 CFAP206Q8IYR0 622 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 DPP10Q8N608 796 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 KIAA1958Q8N8K9 716 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC13A3Q8WWT9 602 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 SGCDQ92629 289 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 PPP1R16AQ96I34 528 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 NKX2-4Q9H2Z4 354 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 DLGAP4Q9Y2H0 992 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 N6AMT1Q9Y5N5 214 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC5A10A0PJK1 596 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 LINC01565O15544 149 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 M6PRP20645 277 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 GJA4P35212 333 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 OPRD1P41143 372 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 WASP42768 502 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 P2RX3P56373 397 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 KIAA0040Q15053 153 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 CDK10Q15131 360 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 CARTPTQ16568 116 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 UBE2UQ5VVX9 321 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 FKBP9P1Q75LS8 142 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 THOC6Q86W42 341 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC22A15Q8IZD6 547 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 ASPSCR1Q9BZE9 553 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 PLA2G2FQ9BZM2 168 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 SLIRPQ9GZT3 109 aaKnown RBP16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 PRM3Q9NNZ6 103 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 ABCB10Q9NRK6 738 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 GULP1Q9UBP9 304 aa16.45■□□□□ 0.22
SHKBP1-205ENST00000594973 E7EQ34 232 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 H3BM21 787 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 SLC16A8O95907 504 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 CATP04040 527 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 UBL4AP11441 157 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 CLK3P49761 638 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 IRF8Q02556 426 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 RUNX3Q13761 415 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 MAPKAPK3Q16644 382 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 GGTA1PQ4G0N0 100 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 USP39Q53GS9 565 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 XKR6Q5GH73 641 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 AGAP6Q5VW22 663 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 AGTRAPQ6RW13 159 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 RNF165Q6ZSG1 346 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 L3MBTL4Q8NA19 623 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 YIPF6Q96EC8 236 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 AGAP4Q96P64 663 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 ZNF300Q96RE9 604 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 KXD1Q9BQD3 176 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 STOX2Q9P2F5 926 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 PCDHGA8Q9Y5G5 932 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 ARNTLO00327 626 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 ICMTO60725 284 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 NPPAP01160 153 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 PGRP06401 933 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 DDX39BQ13838 428 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 CATSPEREQ5SY80 951 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 OTUD3Q5T2D3 398 aaPredicted RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 FRG2Q64ET8 278 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 FAAH2Q6GMR7 532 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 CCDC81Q6ZN84 652 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 ERN2Q76MJ5 926 aaKnown RBP16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 GPR149Q86SP6 731 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 SIX5Q8N196 739 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 GRPEL2Q8TAA5 225 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 FAR1Q8WVX9 515 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 TTC9Q92623 222 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 APIPQ96GX9 242 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 TSSK3Q96PN8 268 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 FRG2BQ96QU4 278 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 PKP4Q99569 1192 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 CHID1Q9BWS9 393 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 HCN2Q9UL51 889 aa16.44■□□□□ 0.22
SHKBP1-205ENST00000594973 PCDHB3Q9Y5E6 796 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms