RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 KCT2Q8NC54 265 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 CAMKVQ8NCB2 501 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 OR4K1Q8NGD4 311 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 ZCCHC10Q8TBK6 192 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 CPT1CQ8TCG5 803 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 SLC5A11Q8WWX8 675 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 CDKL2Q92772 493 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 NEIL2Q969S2 332 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 C8orf44Q96CB5 159 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 TM4SF19Q96DZ7 209 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 VPS50Q96JG6 964 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 GPR22Q99680 433 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 CPNE1Q99829 537 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 SARGQ9BW04 601 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 YIPF2Q9BWQ6 316 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 FAM129AQ9BZQ8 928 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 CAB39LQ9H9S4 337 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 ZBTB20Q9HC78 741 aaPredicted RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 GPAMQ9HCL2 828 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 ARGLU1Q9NWB6 273 aaPredicted RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 MTO1Q9Y2Z2 717 aaKnown RBP8.38□□□□□ -1.07
CHD4-204ENST00000535810 SHANK1Q9Y566 2161 aa8.38□□□□□ -1.07
CHD4-204ENST00000535810 TRBC2A0A5B9 178 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 PHGDHO43175 533 aaKnown RBP8.37□□□□□ -1.07
CHD4-204ENST00000535810 NDUFS4O43181 175 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 KLHL41O60662 606 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 JRKO75564 520 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 BMP10O95393 424 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 HPP00738 406 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 GSTA2P09210 222 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 SLC35G6P0C7Q6 338 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 GP5P40197 560 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 MAGEA4P43358 317 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 AVPR1BP47901 424 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 EMP2P54851 167 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 SLC12A2P55011 1212 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 CDKL1Q00532 357 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 REEP5Q00765 189 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 USP10Q14694 798 aaKnown RBP8.37□□□□□ -1.07
CHD4-204ENST00000535810 ZKSCAN8Q15776 578 aaPredicted RBP8.37□□□□□ -1.07
CHD4-204ENST00000535810 ERCC6LQ2NKX8 1250 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 CATSPEREQ5SY80 951 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 IRAK1BP1Q5VVH5 260 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 C8orf74Q6P047 294 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 C3orf62Q6ZUJ4 267 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 FRA10AC1Q70Z53 315 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 THOC6Q86W42 341 aaKnown RBP8.37□□□□□ -1.07
CHD4-204ENST00000535810 ATCAYQ86WG3 371 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 CCDC25Q86WR0 208 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 PDSS2Q86YH6 399 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 CCDC116Q8IYX3 515 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 SPATA6LQ8N4H0 392 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 FAM26EQ8N5C1 309 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 ZNF740Q8NDX6 193 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 SLC13A3Q8WWT9 602 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 TM9SF4Q92544 642 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 RHBDF1Q96CC6 855 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 MOCOSQ96EN8 888 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 TSPAN17Q96FV3 270 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 TSNARE1Q96NA8 513 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 RBBP8Q99708 897 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 UNKQ9C0B0 810 aaKnown RBP8.37□□□□□ -1.07
CHD4-204ENST00000535810 DERL2Q9GZP9 239 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 SPNS1Q9H2V7 528 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 ZNF160Q9HCG1 818 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 LRRC4CQ9HCJ2 640 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 SLAMF7Q9NQ25 335 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 HCN3Q9P1Z3 774 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 TXNDC16Q9P2K2 825 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 CTNNAL1Q9UBT7 734 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD4-204ENST00000535810 SLC22A14Q9Y267 594 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 B3GNT3Q9Y2A9 372 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 OARD1Q9Y530 152 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 SLC22A7Q9Y694 548 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 V9GYY5 206 aaPredicted RBP8.37□□□□□ -1.07
CHD4-204ENST00000535810 C2CD3Q4AC94 2353 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 HIVEP3Q5T1R4 2406 aa8.37□□□□□ -1.07
CHD4-204ENST00000535810 LOC102723996A0A087X1L8 192 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 IGHV1-45A0A0A0MS14 117 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 NSG1A0A0A6YYJ2 146 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 SGK494L7N484 410 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 PCDH17O14917 1159 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 OR1F1O43749 312 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 RDH16O75452 317 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 KLHL18O94889 574 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 HEXBP07686 556 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 CXCR2P25025 360 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 STX2P32856 288 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 XCR1P46094 333 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 UQCRFS1P47985 274 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 SLC6A12P48065 614 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 HNMTP50135 292 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 RIPPLY3P57055 190 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 SLC7A5Q01650 507 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 GUCY2DQ02846 1103 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 EEF1A2Q05639 463 aaKnown RBP8.36□□□□□ -1.07
CHD4-204ENST00000535810 PWP1Q13610 501 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 CSHL1Q14406 222 aa8.36□□□□□ -1.07
CHD4-204ENST00000535810 EFTUD2Q15029 972 aaKnown RBP eCLIP8.36□□□□□ -1.071e-11■■■□□ 15.4
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms