RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 CTSFQ9UBX1 484 aa12.19□□□□□ -0.46
VEGFA-224ENST00000523873 GPN3Q9UHW5 284 aaPredicted RBP12.19□□□□□ -0.46
VEGFA-224ENST00000523873 GRID1Q9ULK0 1009 aa12.19□□□□□ -0.46
VEGFA-224ENST00000523873 RNF11Q9Y3C5 154 aa12.19□□□□□ -0.46
VEGFA-224ENST00000523873 TNRC6AQ8NDV7 1962 aaKnown RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 A0A0G2JN53 185 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 ZNF860A6NHJ4 632 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 C21orf140B9A014 251 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 C9J4A7 227 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 K7ENP7 123 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 SGK494L7N484 410 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 TXNDC9O14530 226 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 DNAJB6O75190 326 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 SUPT7LO94864 414 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 TBX6O95947 436 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 FURINP09958 794 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 MYL2P10916 166 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 FBLP22087 321 aaKnown RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 PTPN4P29074 926 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 CCT5P48643 541 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 EMP3P54852 163 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 RAB8AP61006 207 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 RPS15P62841 145 aaKnown RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 OLR1P78380 273 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 RGS1Q08116 209 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 TRAF3Q13114 568 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 IL10RAQ13651 578 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 DDX39BQ13838 428 aaKnown RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 E2F2Q14209 437 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 ERV3-1Q14264 604 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 CASP8Q14790 479 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 TBCCQ15814 346 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 RBBP7Q16576 425 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 NDUFA9Q16795 377 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 ZNF678Q5SXM1 525 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 GARNL3Q5VVW2 1013 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 GRHL2Q6ISB3 625 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 INO80CQ6PI98 192 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 LRIG3Q6UXM1 1119 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 PDSS2Q86YH6 399 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 PRSS58Q8IYP2 241 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 CNPY4Q8N129 248 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 ARMC2Q8NEN0 867 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 TRPC4APQ8TEL6 797 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 ATP6V1E2Q96A05 226 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 SLC45A3Q96JT2 553 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 DPH2Q9BQC3 489 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 YIPF2Q9BWQ6 316 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 SLC6A16Q9GZN6 736 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 DRC3Q9H069 523 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 SOX17Q9H6I2 414 aaPredicted RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 NT5DC2Q9H857 520 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 ACTR8Q9H981 624 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 HCN3Q9P1Z3 774 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 COPG2Q9UBF2 871 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 PTRH2Q9Y3E5 179 aaKnown RBP12.18□□□□□ -0.46
VEGFA-224ENST00000523873 DMXL2Q8TDJ6 3036 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 DOCK10Q96BY6 2186 aa12.18□□□□□ -0.46
VEGFA-224ENST00000523873 ZFHX4Q86UP3 3567 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CDC14CA4D256 554 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 ANKDD1BA6NHY2 528 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 ZNF891A8MT65 544 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-224ENST00000523873 RDH16O75452 317 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CREG1O75629 220 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 KLHL18O94889 574 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 RAB40ALP0C0E4 278 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 HNRNPH1P31943 449 aaKnown RBP12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CASP2P42575 452 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CCR10P46092 362 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CCNG1P51959 295 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PRKAA2P54646 552 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 UCNP55089 124 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 HERVK_113P63132 956 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CDC20Q12834 499 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 LAPTM5Q13571 262 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PWP1Q13610 501 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PCLAFQ15004 111 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CPSF6Q16630 551 aaKnown RBP eCLIP12.17□□□□□ -0.46
VEGFA-224ENST00000523873 HIST2H2ACQ16777 129 aaPredicted RBP12.17□□□□□ -0.46
VEGFA-224ENST00000523873 CCDC153Q494R4 210 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 DEFB134Q4QY38 66 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 VWA2Q5GFL6 755 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PAGE2BQ5JRK9 111 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 HIST2H2AA3Q6FI13 130 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
VEGFA-224ENST00000523873 MED27Q6P2C8 311 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PRMT9Q6P2P2 845 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 OVCH1Q7RTY7 1134 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 EXOC3L1Q86VI1 746 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 AMER3Q8N944 861 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 TRPV3Q8NET8 790 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 OR4F6Q8NGB9 312 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 TCP10LQ8TDR4 215 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 UTP15Q8TED0 518 aaKnown RBP12.17□□□□□ -0.46
VEGFA-224ENST00000523873 PPP4R1Q8TF05 950 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 FAM111AQ96PZ2 611 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 SMC6Q96SB8 1091 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 EFHD1Q9BUP0 239 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 C1QTNF3Q9BXJ4 246 aa12.17□□□□□ -0.46
VEGFA-224ENST00000523873 ERVK-6Q9BXR3 956 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms