RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 SLCO2B1O94956 709 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 MOCS3O95396 460 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 VNN2O95498 520 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 LATS1O95835 1130 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 GBAP04062 536 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 CYC1P08574 325 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 ARSBP15848 533 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 UGT1A1P22309 533 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 BDKRB2P30411 391 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 OR1D2P34982 312 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 CCR2P41597 374 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 NLRP11P59045 1033 aaKnown RBP4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 MELKQ14680 651 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 CDO1Q16878 200 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 VWC2Q2TAL6 325 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 KRTCAP3Q53RY4 240 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZRANB3Q5FWF4 1079 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF789Q5FWF6 425 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 DCAF12L2Q5VW00 463 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 FAM91A1Q658Y4 838 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 LCN10Q6JVE6 187 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 DUS1LQ6P1R4 473 aaKnown RBP4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 FAM122CQ6P4D5 195 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 CRIP3Q6Q6R5 217 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 Q6ZPA2 131 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 IRF2BP2Q7Z5L9 587 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 GPR180Q86V85 440 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 PM20D2Q8IYS1 436 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 AADATQ8N5Z0 425 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 PRSS3P2Q8NHM4 247 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 ARRDC2Q8TBH0 407 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 TAS1R2Q8TE23 839 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 SPSB1Q96BD6 273 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 ORAI1Q96D31 301 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 PPIL3Q9H2H8 161 aaKnown RBP4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 ADNPQ9H2P0 1102 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 TMEM245Q9H330 911 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 EBF3Q9H4W6 596 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 HEY2Q9UBP5 337 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 SLC9A2Q9UBY0 812 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 FBXL2Q9UKC9 423 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 MMP17Q9ULZ9 603 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 PIN4Q9Y237 131 aaKnown RBP4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 MAP1AP78559 2803 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 DOCK9Q9BZ29 2069 aa4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 PRRC2CQ9Y520 2896 aaKnown RBP4.5□□□□□ -1.69
HMGB1P23-201ENST00000518743 SF3B1O75533 1304 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 MYO18AQ92614 2054 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 A0A0B4J293 547 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 A0A0G2JK05 382 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 A6NNC1 897 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 INO80B-WBP1J3KQ70 363 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 LAD1O00515 517 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 DVL1O14640 695 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ADAM12O43184 909 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 NMT2O60551 498 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CREG1O75629 220 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 GAGE7O76087 117 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZFYP08048 801 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 DANCRP0C864 163 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 GAGE12FP0CL80 117 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 GAGE12GP0CL81 117 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 GAGE12IP0CL82 117 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CD1EP15812 388 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 NAGAP17050 411 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ADRA2CP18825 462 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 NMBRP28336 390 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CSTF2P33240 577 aaKnown RBP eCLIP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 RPL3P39023 403 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 TDO2P48775 406 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CLK1P49759 484 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CLCNKAP51800 687 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 HNRNPH2P55795 449 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 SELENOVP59797 346 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 SEC61BP60468 96 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 PPP2R2BQ00005 443 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ACSM1Q08AH1 577 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 GAGE1Q13065 139 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 GAGE4Q13068 117 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 RUNX3Q13761 415 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 NFE2L1Q14494 772 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 DAZAP2Q15038 168 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CTF1Q16619 201 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ATP13A5Q4VNC0 1218 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 EFHC1Q5JVL4 640 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 NSUN5P2Q63ZY6 315 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF788Q6ZQV5 615 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZBTB49Q6ZSB9 765 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 TRMT1LQ7Z2T5 733 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZC3HC1Q86WB0 502 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 ZNF611Q8N823 705 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 BOLLQ8N9W6 283 aaKnown RBP4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 WDR20Q8TBZ3 569 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 WFIKKN2Q8TEU8 576 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 CD101Q93033 1021 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 SFXN2Q96NB2 322 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 MTMR9Q96QG7 549 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 HAUS8Q9BT25 410 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 MID1IP1Q9NPA3 183 aa4.49□□□□□ -1.69
HMGB1P23-201ENST00000518743 GKN1Q9NS71 199 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms