RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 HHATLQ9HCP6 504 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 FZD3Q9NPG1 666 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 KCTD5Q9NXV2 234 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 KLHL21Q9UJP4 597 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 FZD4Q9ULV1 537 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 SNX8Q9Y5X2 465 aa17.11■□□□□ 0.33
NUP54-205ENST00000507257 ZNF670-ZNF695F2Z2N8 137 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 RHOCP08134 193 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 RPS19P39019 145 aaKnown RBP17.1■□□□□ 0.33
NUP54-205ENST00000507257 SLC6A12P48065 614 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 IFI44LQ53G44 452 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 MEDAGQ5VYS4 303 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 FRG2Q64ET8 278 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 PLCZ1Q86YW0 608 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 SYT12Q8IV01 421 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 RAVER1Q8IY67 606 aaKnown RBP17.1■□□□□ 0.33
NUP54-205ENST00000507257 LGI4Q8N135 537 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 GPR151Q8TDV0 419 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 SPATA17Q96L03 361 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 FRG2BQ96QU4 278 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 BARHL1Q9BZE3 327 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 MCOLN1Q9GZU1 580 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 ZNF556Q9HAH1 456 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 RPRD1BQ9NQG5 326 aaKnown RBP17.1■□□□□ 0.33
NUP54-205ENST00000507257 PLSCR3Q9NRY6 295 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 CLN6Q9NWW5 311 aa17.1■□□□□ 0.33
NUP54-205ENST00000507257 LSM2Q9Y333 95 aaKnown RBP17.1■□□□□ 0.33
NUP54-205ENST00000507257 A0A1W2PQ09 198 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 CCDC182A6NF36 153 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 ZAR1LA6NP61 321 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 GCM2O75603 506 aaPredicted RBP17.09■□□□□ 0.33
NUP54-205ENST00000507257 CCNB2O95067 398 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 CRYZL1O95825 349 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 COX7A2P14406 83 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 PKLRP30613 574 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 NUDT1P36639 197 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 LIMS1P48059 325 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 HNMTP50135 292 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 CYP4F2P78329 520 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 BEX3Q00994 111 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 RGNQ15493 299 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 FAM110CQ1W6H9 321 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 GPR33Q49SQ1 333 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 SMUG1Q53HV7 270 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 Q5BKY6 102 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 CCDC149Q6ZUS6 474 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 TTLL2Q9BWV7 592 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 ASB8Q9H765 288 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 RLIMQ9NVW2 624 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 BOLA1Q9Y3E2 137 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 CMAHPQ9Y471 501 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 F8W810 466 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 RPIAP49247 311 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 SLC11A2P49281 568 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 KCNQ1P51787 676 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 RUNX1T1Q06455 604 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 RBBP4Q09028 425 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 DMC1Q14565 340 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 SLC35F1Q5T1Q4 408 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 UTP15Q8TED0 518 aaKnown RBP17.09■□□□□ 0.33
NUP54-205ENST00000507257 ELMO1Q92556 727 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 MSLNLQ96KJ4 702 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 NIPSNAP1Q9BPW8 284 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.09■□□□□ 0.33
NUP54-205ENST00000507257 CWH43Q9H720 699 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 NIPAL2Q9H841 368 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 SLC25A19Q9HC21 320 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 LHX3Q9UBR4 397 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 FTSJ1Q9UET6 329 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 PADI3Q9ULW8 664 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 RUVBL1Q9Y265 456 aaKnown RBP17.09■□□□□ 0.33
NUP54-205ENST00000507257 HCN4Q9Y3Q4 1203 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 ZNF451Q9Y4E5 1061 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 PIKFYVEQ9Y2I7 2098 aa17.09■□□□□ 0.33
NUP54-205ENST00000507257 ERVH48-1M5A8F1 160 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 UGDHO60701 494 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 CPSF4O95639 269 aaKnown RBP17.08■□□□□ 0.33
NUP54-205ENST00000507257 CD160O95971 181 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 M6PRP20645 277 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 CBLP22681 906 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 MYL9P24844 172 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 PSMA1P25786 263 aaKnown RBP17.08■□□□□ 0.33
NUP54-205ENST00000507257 CSTF2P33240 577 aaKnown RBP eCLIP17.08■□□□□ 0.33
NUP54-205ENST00000507257 ARF5P84085 180 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 MBTPS1Q14703 1052 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 ANXA8L1Q5VT79 327 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 FAM151BQ6UXP7 276 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 ZNF783Q6ZMS7 281 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 DDX53Q86TM3 631 aaKnown RBP17.08■□□□□ 0.33
NUP54-205ENST00000507257 IL17RCQ8NAC3 791 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 WDR36Q8NI36 951 aaKnown RBP17.08■□□□□ 0.33
NUP54-205ENST00000507257 SPPL2AQ8TCT8 520 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 GPR152Q8TDT2 470 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 FRMD6Q96NE9 622 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 SLC12A9Q9BXP2 914 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 RANGRFQ9HD47 186 aaPredicted RBP17.08■□□□□ 0.33
NUP54-205ENST00000507257 ABCB8Q9NUT2 735 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 ARL15Q9NXU5 204 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 FLRT1Q9NZU1 646 aa17.08■□□□□ 0.33
NUP54-205ENST00000507257 SH3BP4Q9P0V3 963 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms