RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 PDK1Q15118 436 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 CTU2Q2VPK5 515 aaKnown RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 IFI44LQ53G44 452 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 LACTB2Q53H82 288 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 FGD3Q5JSP0 725 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 DCAF10Q5QP82 559 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 LRRC38Q5VT99 294 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 PRAMEF8Q5VWM4 474 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 FBXL22Q6P050 247 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 CYB5D1Q6P9G0 228 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 PODNL1Q6PEZ8 512 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 UNC5DQ6UXZ4 953 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 GPR141Q7Z602 305 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 AMIGO1Q86WK6 493 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 MEX3DQ86XN8 651 aaKnown RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 ELMOD2Q8IZ81 293 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 LYG1Q8N1E2 194 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 KDM8Q8N371 416 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 ANKRD13CQ8N6S4 541 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 ZNF383Q8NA42 475 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 TMEM178AQ8NBL3 297 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 NOA1Q8NC60 698 aaKnown RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 ZBTB44Q8NCP5 570 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 NPEPL1Q8NDH3 523 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 GPRC5AQ8NFJ5 357 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 EXOC6Q8TAG9 804 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 FGFBP3Q8TAT2 258 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 SLC26A7Q8TE54 656 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 GRHL3Q8TE85 626 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 PHLDA1Q8WV24 401 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 IRGQQ8WZA9 623 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 SYAP1Q96A49 352 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 C14orf79Q96F83 325 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 CFAP36Q96G28 342 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 SENP5Q96HI0 755 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 CDKN2AIPNLQ96HQ2 116 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 GMPPAQ96IJ6 420 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 LINC00479Q96M42 142 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 AGAP3Q96P47 875 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 USP28Q96RU2 1077 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 MYCBPQ99417 103 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 PSMB7Q99436 277 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 RAD9AQ99638 391 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 KRTAP2-2Q9BYT5 123 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 S1PR5Q9H228 398 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 TMEM245Q9H330 911 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 Q9H8V8 135 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 LIN28AQ9H9Z2 209 aaKnown RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 MAGEF1Q9HAY2 307 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 SYTL2Q9HCH5 934 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 A4GALTQ9NPC4 353 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 GSN-AS1Q9NRJ2 163 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 GPR173Q9NS66 373 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 ZNF701Q9NV72 531 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 ATAD3AQ9NVI7 634 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 P4HTMQ9NXG6 502 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 MIS18AQ9NYP9 233 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 LRWD1Q9UFC0 647 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 XPO7Q9UIA9 1087 aaKnown RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 GMEB2Q9UKD1 530 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 TSPAN16Q9UKR8 245 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 FOXA2Q9Y261 457 aaPredicted RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 EXOGQ9Y2C4 368 aaKnown RBP2.13□□□□□ -2.07
LMNB1-207ENST00000494185 TRIM17Q9Y577 477 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 PCDH11YQ9BZA8 1340 aa2.13□□□□□ -2.07
LMNB1-207ENST00000494185 DHX29Q7Z478 1369 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SMCHD1A6NHR9 2005 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 A0A0J9YWU9 116 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 C2orf92A0A1B0GVN3 265 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 RGSL1A5PLK6 1076 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 C5orf51A6NDU8 294 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CASTOR2A6NHX0 329 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 C2orf81A6NN90 581 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 F8VVB4 439 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 F8VWA3 439 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CTDSPLO15194 276 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 PRAF2O60831 178 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 NME6O75414 186 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 GAS8-AS1O95177 125 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MOCS2O96007 188 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 IGHDP01880 384 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 AMBPP02760 352 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 HEXBP07686 556 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 PATE4P0C8F1 98 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CCDC192P0DO97 292 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 HSPA8P11142 646 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 KRT3P12035 628 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 IRF2P14316 349 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 AREGP15514 252 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ZNF26P17031 533 aaPredicted RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CA4P22748 312 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ACP1P24666 158 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 ELAVL4P26378 380 aaKnown RBP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 PIK3R1P27986 724 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SFNP31947 248 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CSTF2P33240 577 aaKnown RBP eCLIP2.12□□□□□ -2.07
LMNB1-207ENST00000494185 SERPINB6P35237 376 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 MAP2K2P36507 400 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CETN2P41208 172 aa2.12□□□□□ -2.07
LMNB1-207ENST00000494185 CAMLGP49069 296 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms