RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 KIAA0040Q15053 153 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 ZRANB3Q5FWF4 1079 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 ARMCX5Q6P1M9 558 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 GUF1Q8N442 669 aaKnown RBP1.58□□□□□ -2.16
CCDC93-209ENST00000488908 RYBPQ8N488 228 aaPredicted RBP1.58□□□□□ -2.16
CCDC93-209ENST00000488908 RNF175Q8N4F7 328 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 ZNF561Q8N587 486 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 BANPQ8N9N5 519 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 OR1B1Q8NGR6 318 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 PTPMT1Q8WUK0 201 aaPredicted RBP1.58□□□□□ -2.16
CCDC93-209ENST00000488908 LPGAT1Q92604 370 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 ELSPBP1Q96BH3 223 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 NEDD4LQ96PU5 975 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 MCCC1Q96RQ3 725 aaPredicted RBP1.58□□□□□ -2.16
CCDC93-209ENST00000488908 PAPOLGQ9BWT3 736 aaKnown RBP1.58□□□□□ -2.16
CCDC93-209ENST00000488908 THYN1Q9P016 225 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 ORC3Q9UBD5 711 aaPredicted RBP1.58□□□□□ -2.16
CCDC93-209ENST00000488908 PGAP2Q9UHJ9 254 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 FBXL4Q9UKA2 621 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 PILRBQ9UKJ0 227 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 ITGA11Q9UKX5 1188 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 MGAT4AQ9UM21 535 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 GTF2A1LQ9UNN4 478 aa1.58□□□□□ -2.16
CCDC93-209ENST00000488908 A0A1W2PPQ1 181 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 BCLAF3A2AJT9 711 aaKnown RBP1.57□□□□□ -2.16
CCDC93-209ENST00000488908 OR2A25A4D2G3 310 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 IPO8O15397 1037 aaKnown RBP1.57□□□□□ -2.16
CCDC93-209ENST00000488908 TSC22D2O75157 780 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 ACTL6AO96019 429 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 CD4P01730 458 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 RAB40ALP0C0E4 278 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 P0C879 139 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 BRCC3P46736 316 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 STX17P56962 302 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 SETQ01105 290 aaPredicted RBP1.57□□□□□ -2.16
CCDC93-209ENST00000488908 EBI3Q14213 229 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 IRF3Q14653 427 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 NPTX1Q15818 432 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 IGSF11Q5DX21 431 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 SPANXN4Q5MJ08 99 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 ZNF544Q6NX49 715 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 IRGCQ6NXR0 463 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 RASGEF1AQ8N9B8 481 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 ZNF564Q8TBZ8 553 aaPredicted RBP1.57□□□□□ -2.16
CCDC93-209ENST00000488908 ATL1Q8WXF7 558 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 ROBO4Q8WZ75 1007 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 MOB3AQ96BX8 217 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 PSMD1Q99460 953 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 UNC45AQ9H3U1 944 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 KCNK13Q9HB14 408 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 RAVER2Q9HCJ3 691 aaKnown RBP1.57□□□□□ -2.16
CCDC93-209ENST00000488908 POLKQ9UBT6 870 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 CRCT1Q9UGL9 99 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 CPQQ9Y646 472 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 ZFP37Q9Y6Q3 630 aaPredicted RBP1.57□□□□□ -2.16
CCDC93-209ENST00000488908 GAKO14976 1311 aa1.57□□□□□ -2.16
CCDC93-209ENST00000488908 GPR75-ASB3A0A0A6YYF3 556 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 EPOPA6NHQ4 379 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 CTDSP2O14595 271 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 NPHP1O15259 732 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 LRP3O75074 770 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 OR6B1O95007 311 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 TRIM21P19474 475 aaKnown RBP1.56□□□□□ -2.16
CCDC93-209ENST00000488908 HMGCS2P54868 508 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 CCDC60Q8IWA6 550 aaPredicted RBP1.56□□□□□ -2.16
CCDC93-209ENST00000488908 NAXEQ8NCW5 288 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 NXNL1Q96CM4 212 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 STARD4Q96DR4 205 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 ZBP1Q9H171 429 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 SDCBP2Q9H190 292 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 GSN-AS1Q9NRJ2 163 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 SEPT11Q9NVA2 429 aaKnown RBP1.56□□□□□ -2.16
CCDC93-209ENST00000488908 MOKQ9UQ07 419 aa1.56□□□□□ -2.16
CCDC93-209ENST00000488908 LOC100509620A0A075B734 347 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 LOC102723996A0A087X1L8 192 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 KIR2DL5BA0A0G2JN68 375 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 KIR2DL5BA0A0G2JPC4 375 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 IGLON5A6NGN9 336 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 A8MVM7 634 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 PDXKO00764 312 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 RPS6KA5O75582 802 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 SAGP10523 405 aaPredicted RBP1.55□□□□□ -2.16
CCDC93-209ENST00000488908 GDF1P27539 372 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 SFTPDP35247 375 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 LHX1P48742 406 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 PRKCEQ02156 737 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 LRRC63Q05C16 580 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 RASGEF1BQ0VAM2 473 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 CRMP1Q14194 572 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 NONOQ15233 471 aaKnown RBP eCLIP1.55□□□□□ -2.16
CCDC93-209ENST00000488908 RAB41Q5JT25 222 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 GPR157Q5UAW9 335 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 CPEB2Q7Z5Q1 589 aaKnown RBP1.55□□□□□ -2.16
CCDC93-209ENST00000488908 SMC5Q8IY18 1101 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 KIR2DL5AQ8N109 375 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 CARNMT1Q8N4J0 409 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 IL17REQ8NFR9 667 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 OR10S1Q8NGN2 331 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 AFAP1L1Q8TED9 768 aa1.55□□□□□ -2.16
CCDC93-209ENST00000488908 SETD7Q8WTS6 366 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms