RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 LMNTD1Q8N9Z9 388 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 TMEM35BQ8NCS4 154 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 DDHD1Q8NEL9 900 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 JOSD2Q8TAC2 188 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 ENOX1Q8TC92 643 aaKnown RBP6□□□□□ -1.45
HDAC3-206ENST00000471968 HM13Q8TCT9 377 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 CENPIQ92674 756 aaPredicted RBP6□□□□□ -1.45
HDAC3-206ENST00000471968 TSLPQ969D9 159 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 C11orf24Q96F05 449 aaPredicted RBP6□□□□□ -1.45
HDAC3-206ENST00000471968 TEKT5Q96M29 485 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 POLR1EQ9GZS1 481 aaKnown RBP6□□□□□ -1.45
HDAC3-206ENST00000471968 PRDM14Q9GZV8 571 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 CALHM2Q9HA72 323 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 NKX1-2Q9UD57 310 aaPredicted RBP6□□□□□ -1.45
HDAC3-206ENST00000471968 USP22Q9UPT9 525 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 RUVBL1Q9Y265 456 aaKnown RBP6□□□□□ -1.45
HDAC3-206ENST00000471968 HERC1Q15751 4861 aa6□□□□□ -1.45
HDAC3-206ENST00000471968 GOLGA6L4A6NEF3 574 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 GOLGA6L9A6NEM1 432 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 C2CD4BA6NLJ0 364 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 C3orf84H3BNL1 204 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 POLR2DO15514 142 aaKnown RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 MAFKO60675 156 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CDC123O75794 336 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 OR6B1O95007 311 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 RCBTB2O95199 551 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 RFPL3SP0C7P2 107 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 PYGBP11216 843 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CYP11B1P15538 503 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 SLC9A1P19634 815 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 EPHA1P21709 976 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 MMP8P22894 467 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 HTR7P34969 479 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CD86P42081 329 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 SLCO1A2P46721 670 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 PCYT1AP49585 367 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 IL13RA1P78552 427 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CETN1Q12798 172 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 PTK6Q13882 451 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 DPYSQ14117 519 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 RAB35Q15286 201 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 SF1Q15637 639 aaKnown RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 HKDC1Q2TB90 917 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 PRTGQ2VWP7 1150 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 IQCCQ4KMZ1 466 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 KPRPQ5T749 579 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ALKBH2Q6NS38 261 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 LRRC8BQ6P9F7 803 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 SHQ1Q6PI26 577 aaKnown RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 SYDE1Q6ZW31 735 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 NT5DC3Q86UY8 548 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CILP2Q8IUL8 1156 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 RELL1Q8IUW5 271 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 SCUBE1Q8IWY4 988 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CYP4X1Q8N118 509 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ARMC10Q8N2F6 343 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 FAM71BQ8TC56 605 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ASB15Q8WXK1 588 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 MAML1Q92585 1016 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CAVIN3Q969G5 261 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 KRT12Q99456 494 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 RBM4BQ9BQ04 359 aaKnown RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 C1QTNF5Q9BXJ0 243 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CACNG6Q9BXT2 260 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 KLHL4Q9C0H6 718 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 DRC3Q9H069 523 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 PDCL3Q9H2J4 239 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 CDC42EP4Q9H3Q1 356 aaKnown RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ZNF703Q9H7S9 590 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 COG4Q9H9E3 785 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ADAP2Q9NPF8 381 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 DDX28Q9NUL7 540 aaKnown RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ARMCX3Q9UH62 379 aaPredicted RBP5.99□□□□□ -1.45
HDAC3-206ENST00000471968 FBXW2Q9UKT8 454 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ASF1AQ9Y294 204 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 ZNF711Q9Y462 761 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 RNF115Q9Y4L5 304 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 PPIAL4AQ9Y536 164 aa5.99□□□□□ -1.45
HDAC3-206ENST00000471968 HECTD4Q9Y4D8 3996 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 TRBV11-1A0A0K0K1C0 115 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 VWC2LB2RUY7 222 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 TNFSF13O75888 250 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 LY6HO94772 140 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 CSF3P09919 207 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 NR4A2P43354 598 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 XCR1P46094 333 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 CD151P48509 253 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 RCAN2Q14206 197 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 SLC14A2Q15849 920 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ZNF672Q499Z4 452 aaPredicted RBP5.98□□□□□ -1.45
HDAC3-206ENST00000471968 BCL7AQ4VC05 210 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ERMARDQ5T6L9 678 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 DENND5AQ6IQ26 1287 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 FAM151BQ6UXP7 276 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 RFX8Q6ZV50 586 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 RHOUQ7L0Q8 258 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 KIAA1328Q86T90 577 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 ATPAF2Q8N5M1 289 aa5.98□□□□□ -1.45
HDAC3-206ENST00000471968 LINC01555Q8NAE3 123 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms