RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 NAF1Q96HR8 494 aaKnown RBP4.66□□□□□ -1.66
LINC00397-202ENST00000606785 NSL1Q96IY1 281 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 SAMD8Q96LT4 415 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 NSMCE2Q96MF7 247 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 ALKBH7Q9BT30 221 aaPredicted RBP4.66□□□□□ -1.66
LINC00397-202ENST00000606785 NACAP1Q9BZK3 213 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 OR2B2Q9GZK3 357 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 DDX47Q9H0S4 455 aaKnown RBP4.66□□□□□ -1.66
LINC00397-202ENST00000606785 ZDHHC6Q9H6R6 413 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 DONSONQ9NYP3 566 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 DNPEPQ9ULA0 475 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 AURKCQ9UQB9 309 aa4.66□□□□□ -1.66
LINC00397-202ENST00000606785 COL3A1P02461 1466 aaPredicted RBP4.65□□□□□ -1.66
LINC00397-202ENST00000606785 RAD54L2Q9Y4B4 1467 aa4.65□□□□□ -1.66
LINC00397-202ENST00000606785 SAA2-SAA4A0A096LPE2 208 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 A0A1W2PS18 150 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 K7EPI3 171 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 MAGEB2O15479 319 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 RAF1P04049 648 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 SKILP12757 684 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 FBLP22087 321 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 ALDH1B1P30837 517 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 CETN2P41208 172 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 ASMTP46597 345 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 OR3A3P47888 321 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 CNN1P51911 297 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 HNRNPFP52597 415 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 HUNKP57058 714 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 RPP38P78345 283 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 HERC3Q15034 1050 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 TAF13Q15543 124 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 ZC2HC1CQ53FD0 456 aaPredicted RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 ARMCX4Q5H9R4 360 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 OR6B2Q6IFH4 312 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 GALNT17Q6IS24 598 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 PSRC1Q6PGN9 363 aaPredicted RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 CD164L2Q6UWJ8 174 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 ABRAXAS1Q6UWZ7 409 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 DLEU7Q6UYE1 221 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF852Q6ZMS4 543 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 CCDC73Q6ZRK6 1079 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 TUBA1AQ71U36 451 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 MARK2Q7KZI7 788 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 THEM5Q8N1Q8 247 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 SMG7Q92540 1137 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 LGALS12Q96DT0 336 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 SCRN2Q96FV2 425 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 RBM41Q96IZ5 413 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 TUBA1CQ9BQE3 449 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 WWTR1Q9GZV5 400 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 C5orf66Q9H5L9 145 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 RAVER2Q9HCJ3 691 aaKnown RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 GPN1Q9HCN4 374 aaPredicted RBP4.65□□□□□ -1.67
LINC00397-202ENST00000606785 SLC12A6Q9UHW9 1150 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 ATP8B3O60423 1300 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 CACNA1IQ9P0X4 2223 aa4.65□□□□□ -1.67
LINC00397-202ENST00000606785 MACROD2A1Z1Q3 448 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 ANTXRLA6NF34 631 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 SLC15A5A6NIM6 579 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 E5RGE8 158 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 H3BMM5 538 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 M0R296 226 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 SLC28A1O00337 649 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 CTAGE5O15320 804 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 SSX5O60225 188 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 SMPD2O60906 423 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 PDGFBP01127 241 aaPredicted RBP4.64□□□□□ -1.67
LINC00397-202ENST00000606785 IGHDP01880 384 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 PGK2P07205 417 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 HEXBP07686 556 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF18P17022 549 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 CA6P23280 308 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 ALDH4A1P30038 563 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 NR0B1P51843 470 aaKnown RBP4.64□□□□□ -1.67
LINC00397-202ENST00000606785 TKTL1P51854 596 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 GAS1P54826 345 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 CLDN17P56750 224 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 GCNT1Q02742 428 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 LTBQ06643 244 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 DMTNQ08495 405 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 KLHL30Q0D2K2 578 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 IFT88Q13099 833 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 GK2Q14410 553 aaPredicted RBP4.64□□□□□ -1.67
LINC00397-202ENST00000606785 KIF19Q2TAC6 998 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 GPR33Q49SQ1 333 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 ZNF542PQ5EBM4 170 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 XKR3Q5GH77 459 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 C20orf194Q5TEA3 1177 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 WDR88Q6ZMY6 472 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 ANO5Q75V66 913 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 CPEB2Q7Z5Q1 589 aaKnown RBP4.64□□□□□ -1.67
LINC00397-202ENST00000606785 TAF8Q7Z7C8 310 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 RCOR2Q8IZ40 523 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 FBXW8Q8N3Y1 598 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 LRTM2Q8N967 370 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 SMYD1Q8NB12 490 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 SIDT2Q8NBJ9 832 aaKnown RBP4.64□□□□□ -1.67
LINC00397-202ENST00000606785 CCDC110Q8TBZ0 833 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 SORCS1Q8WY21 1168 aa4.64□□□□□ -1.67
LINC00397-202ENST00000606785 ULK4Q96C45 1275 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms