RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 JRKLQ9Y4A0 524 aa20.54■□□□□ 0.88
DDX39A-215ENST00000590696 RDH16O75452 317 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 TNFRSF8P28908 595 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 GRK3P35626 688 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 AGTR2P50052 363 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 PMP22Q01453 160 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 ZNF766Q5HY98 468 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 CAPN13Q6MZZ7 669 aaPredicted RBP20.53■□□□□ 0.88
DDX39A-215ENST00000590696 H3F3CQ6NXT2 135 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 PAQR3Q6TCH7 311 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 LCTLQ6UWM7 567 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 PDSS2Q86YH6 399 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 PPIL6Q8IXY8 311 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 MYO1HQ8N1T3 1032 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 NAP1L3Q99457 506 aaPredicted RBP20.53■□□□□ 0.88
DDX39A-215ENST00000590696 KCNK13Q9HB14 408 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 TAS2R13Q9NYV9 303 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 LRBAP50851 2863 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 SCN3AQ9NY46 2000 aa20.53■□□□□ 0.88
DDX39A-215ENST00000590696 SLC16A5O15375 505 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 CDH1P12830 882 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 PRF1P14222 555 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 NPPBP16860 134 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 PGAM1P18669 254 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 CCND1P24385 295 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 SP140Q13342 867 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 CRYMQ14894 314 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 ACER2Q5QJU3 275 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 PCGF5Q86SE9 256 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 BEST3Q8N1M1 668 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 GRK7Q8WTQ7 553 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 ITLN2Q8WWU7 325 aaPredicted RBP20.52■□□□□ 0.88
DDX39A-215ENST00000590696 SGPP1Q9BX95 441 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 FAM129AQ9BZQ8 928 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 SUCOQ9UBS9 1254 aaKnown RBP20.52■□□□□ 0.88
DDX39A-215ENST00000590696 NAALAD2Q9Y3Q0 740 aa20.52■□□□□ 0.88
DDX39A-215ENST00000590696 SCN2AQ99250 2005 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 PGRMC1O00264 195 aaKnown RBP20.51■□□□□ 0.87
DDX39A-215ENST00000590696 CCL21O00585 134 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 WISP2O76076 250 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 HIST1H2AGP0C0S8 130 aaPredicted RBP20.51■□□□□ 0.87
DDX39A-215ENST00000590696 SLC35G6P0C7Q6 338 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 HIST1H2ADP20671 130 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 GABRB3P28472 473 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 CDKN2DP55273 166 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 EXT1Q16394 746 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 PHKG1Q16816 387 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 RBM20Q5T481 1227 aaKnown RBP20.51■□□□□ 0.87
DDX39A-215ENST00000590696 RNASEH2BQ5TBB1 312 aaKnown RBP20.51■□□□□ 0.87
DDX39A-215ENST00000590696 MFSD9Q8NBP5 474 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 M1APQ8TC57 530 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 LINGO1Q96FE5 620 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 PEX11GQ96HA9 241 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 CCDC120Q96HB5 630 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 HIST1H2AHQ96KK5 128 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 HIST1H2AJQ99878 128 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 H2AFJQ9BTM1 129 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 RBCK1Q9BYM8 510 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 UNKQ9C0B0 810 aaKnown RBP20.51■□□□□ 0.87
DDX39A-215ENST00000590696 SH3BGRL2Q9UJC5 107 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 SLC22A7Q9Y694 548 aa20.51■□□□□ 0.87
DDX39A-215ENST00000590696 ZNF860A6NHJ4 632 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 CDC123O75794 336 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-215ENST00000590696 AHSGP02765 367 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 CA7P43166 264 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 ST13P50502 369 aaKnown RBP20.5■□□□□ 0.87
DDX39A-215ENST00000590696 RBPJQ06330 500 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 ACTN3Q08043 901 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-215ENST00000590696 DHX9Q08211 1270 aaKnown RBP20.5■□□□□ 0.87
DDX39A-215ENST00000590696 ART3Q13508 389 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 TUBA3CQ13748 450 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 NSDHLQ15738 373 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 MEP1AQ16819 746 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 ZXDCQ2QGD7 858 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-215ENST00000590696 SFT2D3Q587I9 215 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 TUBA3EQ6PEY2 450 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 CRLF3Q8IUI8 442 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 PLPP5Q8NEB5 264 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 GABPB2Q8TAK5 448 aaPredicted RBP20.5■□□□□ 0.87
DDX39A-215ENST00000590696 SIGLEC12Q96PQ1 595 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 HAUS8Q9BT25 410 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 ANKRD10Q9NXR5 420 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 MYO7BQ6PIF6 2116 aa20.5■□□□□ 0.87
DDX39A-215ENST00000590696 BANF1O75531 89 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 GRNP28799 593 aaKnown RBP20.49■□□□□ 0.87
DDX39A-215ENST00000590696 FNTAP49354 379 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 MEF2AQ02078 507 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-215ENST00000590696 RHAGQ02094 409 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 NAA30Q147X3 362 aaPredicted RBP20.49■□□□□ 0.87
DDX39A-215ENST00000590696 ABRAXAS2Q15018 415 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.49■□□□□ 0.877e-7■□□□□ 8.4
DDX39A-215ENST00000590696 PAPD4Q6PIY7 484 aaKnown RBP20.49■□□□□ 0.87
DDX39A-215ENST00000590696 MRGPRGQ86SM5 289 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 OR5T3Q8NGG3 340 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 PYCR2Q96C36 320 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 MOCOSQ96EN8 888 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 LPAR4Q99677 370 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 NPAS2Q99743 824 aa20.49■□□□□ 0.87
DDX39A-215ENST00000590696 UTP23Q9BRU9 249 aaKnown RBP20.49■□□□□ 0.87
DDX39A-215ENST00000590696 MMP25Q9NPA2 562 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms