RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 EXOC3L2Q2M3D2 409 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 INAVAQ3KP66 663 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 ADGRF1Q5T601 910 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 MDGA1Q8NFP4 955 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 KAT2AQ92830 837 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 UPF1Q92900 1129 aaKnown RBP eCLIP10.19□□□□□ -0.785e-19■■■■□ 21.5
USB1-212ENST00000566082 CMTM7Q96FZ5 175 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 MCMBPQ9BTE3 642 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 STARD7Q9NQZ5 370 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 MRPL39Q9NYK5 338 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 DLGAP4Q9Y2H0 992 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 RPL36Q9Y3U8 105 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 DNMT3AQ9Y6K1 912 aaPredicted RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 SESN1Q9Y6P5 492 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 PRAMEF33A0A0G2JMD5 474 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 LOC285095A0A1B0GVY8 99 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 MROH6A6NGR9 719 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 KDELR3O43731 214 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 PRAMEF10O60809 474 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 POLR2EP19388 210 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 RGRP47804 291 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 XKP51811 444 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 BLVRAP53004 296 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 GP2P55259 537 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 CPZQ66K79 652 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 BICRALQ6AI39 1079 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 CAPN13Q6MZZ7 669 aaPredicted RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 MED27Q6P2C8 311 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 FUT10Q6P4F1 479 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 RBM23Q86U06 439 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 GPR150Q8NGU9 434 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 RAET1EQ8TD07 263 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 COL26A1Q96A83 441 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 APIPQ96GX9 242 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 BCL7BQ9BQE9 202 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 SMURF1Q9HCE7 757 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 FAM120CQ9NX05 1096 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 ZNF224Q9NZL3 707 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 TRPS1Q9UHF7 1281 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 RIMKLBQ9ULI2 386 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 HSPE1-MOB4S4R3N1 261 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 A0A1W2PRB8 838 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 CLCA1A8K7I4 914 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 H0YC42 278 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 H3BM21 787 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 MUSKO15146 869 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 CLTBP09497 229 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 CYP2A6P11509 494 aaPredicted RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 ACLYP53396 1101 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 NFATC2Q13469 925 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 SF1Q15637 639 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 OR8H3Q8N146 312 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 METTL4Q8N3J2 472 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 PARP16Q8N5Y8 322 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 KCTD7Q96MP8 289 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 NUFIP1Q9UHK0 495 aaKnown RBP10.19□□□□□ -0.78
USB1-212ENST00000566082 ASF1AQ9Y294 204 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 HCN4Q9Y3Q4 1203 aa10.19□□□□□ -0.78
USB1-212ENST00000566082 GSAPA4D1B5 854 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ISL1P61371 349 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 SNRPD2P62316 118 aaKnown RBP10.18□□□□□ -0.78
USB1-212ENST00000566082 GPR33Q49SQ1 333 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.18□□□□□ -0.78
USB1-212ENST00000566082 C11orf88Q6PI97 169 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ALKAL1Q6UXT8 129 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 FGD2Q7Z6J4 655 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 GPR149Q86SP6 731 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 GHDCQ8N2G8 530 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 PGBD5Q8N414 524 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 NLGN2Q8NFZ4 835 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 RASSF5Q8WWW0 418 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 GEMIN6Q8WXD5 167 aaKnown RBP10.18□□□□□ -0.78
USB1-212ENST00000566082 BRI3BPQ8WY22 251 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 MMP28Q9H239 520 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 FAM83DQ9H4H8 585 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 SPG21Q9NZD8 308 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 OARD1Q9Y530 152 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 THSD7AQ9UPZ6 1657 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 GJB5O95377 273 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 NFE2L1Q14494 772 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 HEPACAMQ14CZ8 416 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 PCBP2Q15366 365 aaKnown RBP eCLIP10.18□□□□□ -0.783e-13■■■■■ 34
USB1-212ENST00000566082 BCL7AQ4VC05 210 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ATP13A5Q4VNC0 1218 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 CEP68Q76N32 757 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ZNF467Q7Z7K2 595 aaPredicted RBP10.18□□□□□ -0.78
USB1-212ENST00000566082 PEX5LQ8IYB4 626 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 CELF2-AS1Q8N7Q2 184 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ARL14EPQ8N8R7 260 aaPredicted RBP10.18□□□□□ -0.78
USB1-212ENST00000566082 LRRC20Q8TCA0 184 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 SOCS4Q8WXH5 440 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 TP53INP1Q96A56 240 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 WACQ9BTA9 647 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 DOHHQ9BU89 302 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 IL1RAPQ9NPH3 570 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 ACSL6Q9UKU0 697 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 C6orf47O95873 294 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 TAS2R41P59536 307 aa10.18□□□□□ -0.78
USB1-212ENST00000566082 CSTF1Q05048 431 aaKnown RBP10.18□□□□□ -0.78
USB1-212ENST00000566082 KEAP1Q14145 624 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms