RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, human

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR3-208	ENST00000496050	AGAP6	Q5VW22	663 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	FCRLA	Q7L513	359 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	PRSS42	Q7Z5A4	293 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	DCUN1D3	Q8IWE4	304 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	LRTM2	Q8N967	370 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	GPRC5A	Q8NFJ5	357 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	TRIM58	Q8NG06	486 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	OR1L3	Q8NH93	324 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	ST7L	Q8TDW4	575 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	EEF2KMT	Q96G04	330 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	C10orf90	Q96M02	699 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	GAL3ST4	Q96RP7	486 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	ATP6V0B	Q99437	205 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	EXOC1	Q9NV70	894 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	TBC1D13	Q9NVG8	400 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	TMOD3	Q9NYL9	352 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	WWOX	Q9NZC7	414 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	MAD2L2	Q9UI95	211 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	FBXL4	Q9UKA2	621 aa		4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	ELF5	Q9UKW6	265 aa	Predicted RBP	4.85	□□□□□ -1.63
SSR3-208	ENST00000496050	SMCHD1	A6NHR9	2005 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	GPRASP1	Q5JY77	1395 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	NPHP3	Q7Z494	1330 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050		A0A087X0K7	114 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	ANKDD1B	A6NHY2	528 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	MSGN1	A6NI15	193 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050		E5RGE8	158 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	PRSS44	E7EML9	344 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	FPGT	O14772	594 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	ACSL4	O60488	711 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	TRMU	O75648	421 aa	Known RBP	4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	OLFM2	O95897	454 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	RAF1	P04049	648 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	HMBS	P08397	361 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	PRSS56	P0CW18	603 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	SLC2A2	P11168	524 aa	Predicted RBP	4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	GOT1	P17174	413 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	TIMP3	P35625	211 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	CDKN1A	P38936	164 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	RPP38	P78345	283 aa	Known RBP	4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	ACKR1	Q16570	336 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	KCTD11	Q693B1	232 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	MACC1	Q6ZN28	852 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	C18orf65	Q6ZTR6	163 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	SLC24A5	Q71RS6	500 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	COX8C	Q7Z4L0	72 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	ZNF843	Q8N446	348 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	NXPE2	Q96DL1	559 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	NODAL	Q96S42	347 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	THAP2	Q9H0W7	228 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	EGLN3	Q9H6Z9	239 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	ATP13A3	Q9H7F0	1226 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	SLC52A3	Q9NQ40	469 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	MRPL17	Q9NRX2	175 aa	Known RBP	4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	PANK4	Q9NVE7	773 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	NSG2	Q9Y328	171 aa		4.84	□□□□□ -1.63
SSR3-208	ENST00000496050	KIAA1210	Q9ULL0	1709 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	IGHV4-4	A0A075B6R2	117 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	PGRMC2	O15173	223 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	TEX28	O15482	410 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	KIF5C	O60282	957 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	CDC123	O75794	336 aa	Predicted RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	LETM1	O95202	739 aa	Predicted RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	NADK	O95544	446 aa	Predicted RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	SBK2	P0C263	348 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	CPA3	P15088	417 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	RBMS1	P29558	406 aa	Known RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	CHRNB4	P30926	498 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	ADAR	P55265	1226 aa	Known RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	LASP1	Q14847	261 aa	Known RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	ZNF74	Q16587	644 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	IFI44L	Q53G44	452 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	PRAMEF8	Q5VWM4	474 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	TMEM126B	Q8IUX1	230 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	CNTN4	Q8IWV2	1026 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	PEX5L	Q8IYB4	626 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	TMEM99	Q8N816	258 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	OR2T11	Q8NH01	316 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	APOBEC4	Q8WW27	367 aa	Known RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	LGALS12	Q96DT0	336 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	THAP9	Q9H5L6	903 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	MAGEF1	Q9HAY2	307 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	INTS10	Q9NVR2	710 aa	Known RBP	4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	COLEC10	Q9Y6Z7	277 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	KIAA1217	Q5T5P2	1943 aa		4.83	□□□□□ -1.64
SSR3-208	ENST00000496050	SPATA31D1	Q6ZQQ2	1576 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	SPAG9	O60271	1321 aa	Known RBP	4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	ARID2	Q68CP9	1835 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050		A8MVM7	634 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	SLCO1B7	G3V0H7	640 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050		H3BMM5	538 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	HTATSF1	O43719	755 aa	Known RBP	4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	ZBTB14	O43829	449 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	CD48	P09326	243 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	RPL35A	P18077	110 aa	Known RBP	4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	NT5C2	P49902	561 aa		4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	NR0B1	P51843	470 aa	Known RBP	4.82	□□□□□ -1.64
SSR3-208	ENST00000496050	LBX1	P52954	281 aa		4.82	□□□□□ -1.64

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