RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 INSL6Q9Y581 213 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 LYVE1Q9Y5Y7 322 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 NFS1Q9Y697 457 aa4.58□□□□□ -1.68
HMGB3P9-201ENST00000441799 GLI3P10071 1580 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 DISP2A7MBM2 1401 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 NID2Q14112 1375 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 UMODL1Q5DID0 1318 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TEX13CA0A0J9YWL9 993 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 A0A1W2PQ09 198 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 KRTAP23-1A1A580 65 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR6C76A6NM76 312 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SUPT3HB4E1H0 165 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMEM238C9JI98 176 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 GRM8O00222 908 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SCAMP2O15127 329 aaKnown RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 PSMD3O43242 534 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TGFB1I1O43294 461 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TBX19O60806 448 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 B4GALT2O60909 372 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 NXPH2O95156 264 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SYF2O95926 243 aaKnown RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CH25HO95992 272 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 PGK1P00558 417 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 F9P00740 461 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SERPINA3P01011 423 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 IFNA2P01563 188 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 AMY2AP04746 511 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 MMP3P08254 477 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 GNAI3P08754 354 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 FBP1P09467 338 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SBK2P0C263 348 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 OCM2P0CE71 109 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 OCMP0CE72 109 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CCL2P13500 99 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 JUPP14923 745 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 XRCC1P18887 633 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 AMY2BP19961 511 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 MAKP20794 623 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 MSR1P21757 451 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ACVR2AP27037 513 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 EPHB2P29323 1055 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 HOXA13P31271 388 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 OTX2P32243 289 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 GJA4P35212 333 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 GPX4P36969 197 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 YAP1P46937 504 aaKnown RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CAPZBP47756 277 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 OMPP47874 163 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR3A3P47888 321 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 NPY4RP50391 375 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CDK7P50613 346 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 AP3S2P59780 193 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CXCR4P61073 352 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ARF6P62330 175 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TGM3Q08188 693 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ILF3Q12906 894 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 PPIGQ13427 754 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 EIF4EBP2Q13542 120 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 PCOLCEQ15113 449 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNHIT3Q15649 155 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TOMM34Q15785 309 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TBCCQ15814 346 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 BAK1Q16611 211 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 GOLGA7BQ2TAP0 167 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CERKLQ49MI3 558 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TEX44Q53QW1 395 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 LDLRAP1Q5SW96 308 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CCNYL2Q5T2Q4 361 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 UBAP2Q5T6F2 1119 aaKnown RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 LIPJQ5W064 366 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC25A25Q6KCM7 469 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 RWDD4Q6NW29 188 aaKnown RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CYP20A1Q6UW02 462 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SLC39A5Q6ZMH5 540 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 LRRC70Q7Z2Q7 622 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF551Q7Z340 670 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TRMT11Q7Z4G4 463 aaKnown RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF589Q86UQ0 364 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 TMC8Q8IU68 726 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 LIX1LQ8IVB5 337 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 KATNAL2Q8IYT4 538 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 SYNE4Q8N205 404 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 LNX2Q8N448 690 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 C1orf52Q8N6N3 182 aaKnown RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 IL17RCQ8NAC3 791 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 KDM1BQ8NB78 822 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 CLRN3Q8NCR9 226 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ADPRHL1Q8NDY3 354 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 OR8J1Q8NGP2 316 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 PCDH19Q8TAB3 1148 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 NANPQ8TBE9 248 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 LRRC20Q8TCA0 184 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 RLN3Q8WXF3 142 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 FIG4Q92562 907 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 HAS2Q92819 552 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 MVB12AQ96EY5 273 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 LINGO1Q96FE5 620 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 APIPQ96GX9 242 aa4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 ZNF486Q96H40 463 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P9-201ENST00000441799 DYDC2Q96IM9 177 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms