RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 GRSF1Q12849 480 aaKnown RBP eCLIP8.54□□□□□ -1.04
RTN4-206ENST00000394611 DUSP4Q13115 394 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 CHIT1Q13231 466 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 TUBA3CQ13748 450 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 LRRC66Q68CR7 880 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 CCSAPQ6IQ19 270 aaPredicted RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 OLIG3Q7RTU3 272 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 PLPPR4Q7Z2D5 763 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 RNF180Q86T96 592 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 SERPINA9Q86WD7 417 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 TRIM69Q86WT6 500 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 CYP4Z2PQ8N1L4 340 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 SLC5A8Q8N695 610 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 NATD1Q8N6N6 113 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 LRRC17Q8N6Y2 441 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 RTL3Q8N8U3 475 aaKnown RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 IRGQQ8WZA9 623 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 IGSF8Q969P0 613 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 COL26A1Q96A83 441 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 FUBP1Q96AE4 644 aaKnown RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 FRMD6Q96NE9 622 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 ELAC1Q9H777 363 aaKnown RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 CCNB1IP1Q9NPC3 277 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 RDH8Q9NYR8 311 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 FZD4Q9ULV1 537 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 PCDHA9Q9Y5H5 950 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 CKAP5Q14008 2032 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 IRAK2O43187 625 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 KLHL18O94889 574 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 ANXA5P08758 320 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 HOXD8P13378 290 aaPredicted RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 DARSP14868 501 aaKnown RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 ACPPP15309 386 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 CPN2P22792 545 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 BUD31P41223 144 aaPredicted RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 GSTM5P46439 218 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 ARCN1P48444 511 aaKnown RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 RCAN2Q14206 197 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 LRRC32Q14392 662 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 COL13A1Q5TAT6 717 aaPredicted RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 AGAP6Q5VW22 663 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 IL20RBQ6UXL0 311 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 USP45Q70EL2 814 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 UBE2R2Q712K3 238 aaPredicted RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 TMPRSS11BQ86T26 416 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 KRT73Q86Y46 540 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 BEND7Q8N7W2 519 aaPredicted RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 ZNF557Q8N988 423 aaPredicted RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 XAGE5Q8WWM1 108 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 AGAP4Q96P64 663 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 SORBS1Q9BX66 1292 aaKnown RBP8.54□□□□□ -1.04
RTN4-206ENST00000394611 TLR9Q9NR96 1032 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 VNN3Q9NY84 501 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 RPS6KA6Q9UK32 745 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 MKL2Q9ULH7 1088 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 DLGAP4Q9Y2H0 992 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 MAGEA6P43360 314 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 STC1P52823 247 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 HSPB3Q12988 150 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 NAE1Q13564 534 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 GPR68Q15743 365 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 DPY19L1Q2PZI1 675 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 TIMM50Q3ZCQ8 353 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 KIAA0319Q5VV43 1072 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 AFTPHQ6ULP2 937 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 ANKS3Q6ZW76 656 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 CYP2U1Q7Z449 544 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 OR7G1Q8NGA0 311 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 MAP6Q96JE9 813 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 MED28Q9H204 178 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 ZFYVE1Q9HBF4 777 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 C5AR2Q9P296 337 aa8.54□□□□□ -1.04
RTN4-206ENST00000394611 RFXAPO00287 272 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZNF197O14709 1029 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ERAL1O75616 437 aaKnown RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 SCELO95171 688 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 BCKDHAP12694 445 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 GGT1P19440 569 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TNFSF8P32971 234 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 PIK3CBP42338 1070 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TTPAP49638 278 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 PSEN2P49810 448 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ACLYP53396 1101 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ADARB1P78563 741 aaKnown RBP8.53□□□□□ -1.04
RTN4-206ENST00000394611 MFSD10Q14728 455 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 PTCHD3Q3KNS1 767 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TMIGD1Q6UXZ0 262 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 BBS7Q8IWZ6 715 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 SVOPLQ8N434 492 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ATP6V1C2Q8NEY4 427 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ST8SIA2Q92186 375 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 ZNF583Q96ND8 569 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 SLC6A13Q9NSD5 602 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 C17orf102A2RUQ5 167 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 PCDHGA12O60330 932 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 PIP5K1CO60331 668 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 F2P00734 622 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 TGFB1P01137 390 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 HRGP04196 525 aa8.53□□□□□ -1.04
RTN4-206ENST00000394611 PROS1P07225 676 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms