RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 EVLQ9UI08 416 aaPredicted RBP11.75□□□□□ -0.53
PCF11-201ENST00000298281 GNG8Q9UK08 70 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 EOMESO95936 686 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 PLATP00750 562 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 SRPRAP08240 638 aaKnown RBP11.75□□□□□ -0.53
PCF11-201ENST00000298281 CHIT1Q13231 466 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 EIF2B1Q14232 305 aaKnown RBP11.75□□□□□ -0.53
PCF11-201ENST00000298281 PCBP2Q15366 365 aaKnown RBP eCLIP11.75□□□□□ -0.532e-7■■■■■ 27.2
PCF11-201ENST00000298281 DCDC5Q6ZRR9 648 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 PRR18Q8N4B5 295 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 ZNF610Q8N9Z0 462 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 DEFB118Q96PH6 123 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 C1orf109Q9NX04 203 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 NENFQ9UMX5 172 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 POFUT2Q9Y2G5 429 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 B4GALT5O43286 388 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 ARL16Q0P5N6 197 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 LRRC37A5PQ49AS3 106 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 ARL9Q6T311 187 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.75□□□□□ -0.53
PCF11-201ENST00000298281 P2RY8Q86VZ1 359 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 SPPL2CQ8IUH8 684 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 PSD4Q8NDX1 1056 aa11.75□□□□□ -0.53
PCF11-201ENST00000298281 PIWIL1Q96J94 861 aaKnown RBP11.75□□□□□ -0.53
PCF11-201ENST00000298281 ZNF701Q9NV72 531 aaPredicted RBP11.75□□□□□ -0.53
PCF11-201ENST00000298281 C2orf27AQ580R0 203 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 KIAA0319Q5VV43 1072 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 BORAQ6PGQ7 559 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ZC3H14Q6PJT7 736 aaKnown RBP11.74□□□□□ -0.53
PCF11-201ENST00000298281 ADGRD1Q6QNK2 874 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 OR9K2Q8NGE7 335 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 CTPS2Q9NRF8 586 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ZNF355PQ9NSJ1 428 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 C19orf25Q9UFG5 118 aaPredicted RBP11.74□□□□□ -0.53
PCF11-201ENST00000298281 TLL2Q9Y6L7 1015 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 BANF1O75531 89 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ACADVLP49748 655 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 FLT3LGP49771 235 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 RAB15P59190 212 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 NXNL1Q96CM4 212 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ST6GALNAC4Q9H4F1 302 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 SERTAD4Q9NUC0 356 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 NEMP2A6NFY4 417 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 GRID2O43424 1007 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 RNF13O43567 381 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 GSTT2P0CG29 244 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 RORCP51449 518 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 PDGFRLQ15198 375 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 TMEM69Q5SWH9 247 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ALDH16A1Q8IZ83 802 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 TM9SF4Q92544 642 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 CPXM1Q96SM3 734 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 CIB1Q99828 191 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 A0A1B0GVI7 797 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 TGFB1I1O43294 461 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 DCST2Q5T1A1 773 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 HAGHLQ6PII5 290 aaPredicted RBP11.74□□□□□ -0.53
PCF11-201ENST00000298281 GRPEL2Q8TAA5 225 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 NDNFQ8TB73 568 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 STK35Q8TDR2 534 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 GLYATL2Q8WU03 294 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 TTLL8A6PVC2 850 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 PRMT2P55345 433 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ARL13AQ5H913 290 aaPredicted RBP11.74□□□□□ -0.53
PCF11-201ENST00000298281 FUT10Q6P4F1 479 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 GLIS3Q8NEA6 775 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 OR10T2Q8NGX3 314 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 MR1Q95460 341 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 SLC2A8Q9NY64 477 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 NDUFAF4Q9P032 175 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 SLC17A7Q9P2U7 560 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 A0A1B0GVT2 93 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 A0A1W2PQ45 241 aaPredicted RBP11.74□□□□□ -0.53
PCF11-201ENST00000298281 A0A1W2PQY0 241 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 KCNU1A8MYU2 1149 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 BLOC1S5-TXNDC5H3BN57 136 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 AIREO43918 545 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 HSPA7P48741 367 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 FNTBP49356 437 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 CAP1Q01518 475 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 TAF1AQ15573 450 aaPredicted RBP11.74□□□□□ -0.53
PCF11-201ENST00000298281 CHRFAM7AQ494W8 412 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 JOSD2Q8TAC2 188 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 SLC35G5Q96KT7 338 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 NEDD4LQ96PU5 975 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 TUBB1Q9H4B7 451 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ITM2CQ9NQX7 267 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 ABCB8Q9NUT2 735 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 MGAT4CQ9UBM8 478 aa11.74□□□□□ -0.53
PCF11-201ENST00000298281 A0A087WUU8 490 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 MALLQ13021 153 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 SLC10A1Q14973 349 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 SLC39A4Q6P5W5 647 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 ASB18Q6ZVZ8 466 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 LINC00471Q8N535 108 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 VGLL2Q8N8G2 317 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 CASTOR1Q8WTX7 329 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 GPR20Q99678 358 aa11.73□□□□□ -0.53
PCF11-201ENST00000298281 HNRNPABQ99729 332 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms