RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 CDH15P55291 814 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 GRB7Q14451 532 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 CARTPTQ16568 116 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 C6orf136Q5SQH8 315 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 OLFML2AQ68BL7 652 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 ADNP2Q6IQ32 1131 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 TTC9BQ8N6N2 239 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 C17orf62Q9BQA9 187 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 PTGDR2Q9Y5Y4 395 aa16.69■□□□□ 0.26
CDCP1-201ENST00000296129 GLOD5A6NK44 160 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 ANXA2P2A6NMY6 339 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PSMD9O00233 223 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 SDHDO14521 159 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 CPNE3O75131 537 aaKnown RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 ANXA2P07355 339 aaKnown RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 MPC1LP0DKB6 136 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 TYRP1P17643 537 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 AKIRIN2Q53H80 203 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 NCEH1Q6PIU2 408 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 MRPL10Q7Z7H8 261 aaKnown RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 Q8N9G6 341 aaPredicted RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 RHEBL1Q8TAI7 183 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PXYLP1Q8TE99 480 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 NDC1Q9BTX1 674 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 ALKBH4Q9NXW9 302 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 H7BY64 318 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 GMPRP36959 345 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 SLC29A4Q7RTT9 530 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 ZDHHC14Q8IZN3 488 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 OR2AJ1Q8NGZ0 328 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 SORCS1Q8WY21 1168 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 SHDQ96IW2 340 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PRAP1Q96NZ9 151 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 HERPUD2Q9BSE4 406 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 MEAF6Q9HAF1 191 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 TAS2R7Q9NYW3 318 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 FAM170BA6NMN3 283 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PRMT3O60678 531 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 HNRNPA1P09651 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 ZNF630Q2M218 657 aaPredicted RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 C6orf89Q6UWU4 347 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 KRTCAP2Q8N6L1 136 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 OR4K1Q8NGD4 311 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 A0A1W2PP55 124 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 CLDN25C9JDP6 229 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 M0QZQ0 153 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 POLR2CP19387 275 aaPredicted RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 GSTM3P21266 225 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 FUT4P22083 530 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PRKACGP22612 351 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 RPP38P78345 283 aaKnown RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 SCN1BQ07699 218 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PHF19Q5T6S3 580 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 LIPJQ5W064 366 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 B3GNT9Q6UX72 402 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 GALNT7Q86SF2 657 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 LRRTM3Q86VH5 581 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 TREML1Q86YW5 311 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 OR52E4Q8NGH9 312 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 ZNF778Q96MU6 729 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 UCK2Q9BZX2 261 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 SFXN1Q9H9B4 322 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 MALT1Q9UDY8 824 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 MYH3P11055 1940 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 E2F2Q14209 437 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PDSS2Q86YH6 399 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 RGS17Q9UGC6 210 aaPredicted RBP16.68■□□□□ 0.26
CDCP1-201ENST00000296129 PKD1L3Q7Z443 1732 aa16.68■□□□□ 0.26
CDCP1-201ENST00000296129 EDN1P05305 212 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 PUM1Q14671 1186 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDCP1-201ENST00000296129 CYBRD1Q53TN4 286 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 PRPF38BQ5VTL8 546 aaKnown RBP16.67■□□□□ 0.26
CDCP1-201ENST00000296129 TCF7L1Q9HCS4 588 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 TCRBV21S2A2A0A5A6 115 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 SLC16A5O15375 505 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 TGM5O43548 720 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 TLX3O43711 291 aaPredicted RBP16.67■□□□□ 0.26
CDCP1-201ENST00000296129 RFPL2O75678 378 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 PAK4O96013 591 aaPredicted RBP16.67■□□□□ 0.26
CDCP1-201ENST00000296129 HMGN1P05114 100 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 FDXRP22570 491 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 RORCP51449 518 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 SLC22A15Q8IZD6 547 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 ZBED3Q96IU2 234 aaPredicted RBP16.67■□□□□ 0.26
CDCP1-201ENST00000296129 REEP4Q9H6H4 257 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 GMEB2Q9UKD1 530 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 PCDHGB7Q9Y5F8 929 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 PRODHO43272 600 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 CCNKO75909 580 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 CSTF2P33240 577 aaKnown RBP eCLIP16.67■□□□□ 0.26
CDCP1-201ENST00000296129 ARSDP51689 593 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 NCSTNQ92542 709 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 MKS1Q9NXB0 559 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 NUDT6P53370 316 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 RPS21P63220 83 aaKnown RBP16.67■□□□□ 0.26
CDCP1-201ENST00000296129 LAPTM4AQ15012 233 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 SPATS1Q496A3 300 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 NADK2Q4G0N4 442 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 SFT2D3Q587I9 215 aa16.67■□□□□ 0.26
CDCP1-201ENST00000296129 GIN1Q9NXP7 522 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms