RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 A8MXQ7 604 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 HNRNPCL2B2RXH8 293 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 TIPRLO75663 272 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 OLFM2O95897 454 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 TBX18O95935 607 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 DCNP07585 359 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 SP9P0CG40 484 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 KRT10P13645 584 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 P4HA1P13674 534 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 IL7RP16871 459 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF182P17025 639 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 RRM1P23921 792 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ACAT1P24752 427 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CYP2F1P24903 491 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 LMO2P25791 158 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 BDKRB2P30411 391 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GDI1P31150 447 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 HOXA6P31267 233 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GTF2H1P32780 548 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 BSGP35613 385 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GNL1P36915 607 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 PPP1R2P41236 205 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CASP4P49662 377 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 VAMP7P51809 220 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 HNRNPH2P55795 449 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ERVFC1-1P60608 527 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 MYL6P60660 151 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 RPS3AP61247 264 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 TNNC1P63316 161 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 INCA1Q0VD86 236 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 C1orf220Q5T0J3 134 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 STXBP5Q5T5C0 1151 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF658Q5TYW1 1059 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 SNX30Q5VWJ9 437 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 KCTD18Q6PI47 426 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCNI2Q6ZMN8 369 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 TPRG1Q6ZUI0 275 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 DENND5BQ6ZUT9 1274 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 SATL1Q86VE3 508 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZC3H3Q8IXZ2 948 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 MAML2Q8IZL2 1156 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 TTC39CQ8N584 583 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 TMEM116Q8NCL8 245 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZBTB44Q8NCP5 570 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPATA22Q8NHS9 363 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 FAM3CQ92520 227 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 MYLPFQ96A32 169 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CCDC127Q96BQ5 260 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 PCED1BQ96HM7 432 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 LMLNQ96KR4 655 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 LRRC3BQ96PB8 259 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GCNAQ96QF7 691 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 SEPT5Q99719 369 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 MRPL45Q9BRJ2 306 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 PI4K2AQ9BTU6 479 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPRY4Q9C004 299 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ELOVL4Q9GZR5 314 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GOLPH3LQ9H4A5 285 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CYP3A43Q9HB55 503 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 FBRSL1Q9HCM7 1045 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CSNK1G1Q9HCP0 422 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 PRMT8Q9NR22 394 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 HEBP1Q9NRV9 189 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 RMND1Q9NWS8 449 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 COMMD8Q9NX08 183 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GCNT4Q9P109 453 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 COQ4Q9Y3A0 265 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 GON4LQ3T8J9 2241 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 DMDP11532 3685 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CNOT1A5YKK6 2376 aaKnown RBP3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 CACNA1EQ15878 2313 aa3.52□□□□□ -1.85
CKS1BP3-201ENST00000600888 ATP8B3O60423 1300 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 CACNA1GO43497 2377 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRAV19A0A0A6YYK7 116 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 A0A1W2PQF6 199 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF840PA6NDX5 716 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 GOLGA6L4A6NEF3 574 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZNF587BE7ETH6 402 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 F8VP50 259 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SPECC1L-ADORA2AF8WAN1 911 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 TULP2O00295 520 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 VCYO14598 125 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRDMT1O14717 391 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 CLGNO14967 610 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 CETN3O15182 167 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 HCRTO43612 131 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 STX10O60499 249 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 AKAP3O75969 853 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 NKX2-2O95096 273 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 SMC2O95347 1197 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PRAMEF12O95522 483 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 OAS1P00973 400 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 HLA-DRAP01903 254 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 ZDHHC11BP0C7U3 371 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 TDGF1P13385 188 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 KRT13P13646 458 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 TRIM21P19474 475 aaKnown RBP3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 BDNFP23560 247 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 NR2F2P24468 414 aa3.51□□□□□ -1.85
CKS1BP3-201ENST00000600888 PSMA4P25789 261 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms