RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PGM3O95394 542 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 PAK4O96013 591 aaPredicted RBP17.45■□□□□ 0.38
SMPD3-211ENST00000568373 PAX7P23759 505 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 RPS9P46781 194 aaKnown RBP17.45■□□□□ 0.38
SMPD3-211ENST00000568373 MEF2AQ02078 507 aaPredicted RBP17.45■□□□□ 0.38
SMPD3-211ENST00000568373 ARHGAP19Q14CB8 494 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 KIAA1211LQ6NV74 962 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 ZNF621Q6ZSS3 439 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 ARMCX6Q7L4S7 300 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 TP53I13Q8NBR0 393 aaPredicted RBP17.45■□□□□ 0.38
SMPD3-211ENST00000568373 NETO1Q8TDF5 533 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 POP5Q969H6 163 aaKnown RBP17.45■□□□□ 0.38
SMPD3-211ENST00000568373 UBE2E3Q969T4 207 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 SH3KBP1Q96B97 665 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 MRPS26Q9BYN8 205 aaKnown RBP17.45■□□□□ 0.38
SMPD3-211ENST00000568373 PNPLA3Q9NST1 481 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 ERVK-11Q9UQG0 969 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 TSC22D4Q9Y3Q8 395 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 F5P12259 2224 aa17.45■□□□□ 0.38
SMPD3-211ENST00000568373 PLOD2O00469 737 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 CPSF4O95639 269 aaKnown RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 CLPTM1O96005 669 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 TGFB1P01137 390 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 ENGP17813 658 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 PIK3CBP42338 1070 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 MTHFRP42898 656 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 RPS21P63220 83 aaKnown RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 DLX2Q07687 328 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 ZNF763Q0D2J5 394 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 COMMD6Q7Z4G1 85 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 C2orf73Q8N5S3 287 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 COQ8BQ96D53 544 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 RIPOR3Q96MK2 946 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 MKRN2Q9H000 416 aaKnown RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 MAGIXQ9H6Y5 334 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 OLAHQ9NV23 265 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 FBXL12Q9NXK8 326 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 SMPD3Q9NY59 655 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 BTNL2Q9UIR0 455 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 CFAP20Q9Y6A4 193 aaKnown RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 MYOCOSA0A1B0GUC4 107 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 SERPINA1P01009 418 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 SLC35G4P0C7Q5 338 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 GPX2P18283 190 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 IL1RNP18510 177 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 IDSP22304 550 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 SLC36A3Q495N2 470 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 ANXA8L1Q5VT79 327 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 TMEM214Q6NUQ4 689 aaKnown RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 GPR155Q7Z3F1 870 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 ZNF740Q8NDX6 193 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 VPS37AQ8NEZ2 397 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 MAGEE2Q8TD90 523 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 GANCQ8TET4 914 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 KLK6Q92876 244 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 TMBIM1Q969X1 311 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 CXorf40BQ96DE9 158 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 C1QTNF2Q9BXJ5 285 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 OR51B5Q9H339 312 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 PHPT1Q9NRX4 125 aaPredicted RBP17.44■□□□□ 0.38
SMPD3-211ENST00000568373 PADI4Q9UM07 663 aa17.44■□□□□ 0.38
SMPD3-211ENST00000568373 EME2A4GXA9 379 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 C1QCP02747 245 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 GNAO1P09471 354 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 PABPC4LP0CB38 370 aaKnown RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 HOXB6P17509 224 aaKnown RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 NTSR1P30989 418 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 HSD17B2P37059 387 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 PHEXP78562 749 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 APOFQ13790 326 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 TBPL2Q6SJ96 375 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 TMIGD1Q6UXZ0 262 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 MTSS1LQ765P7 747 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 FAM129CQ86XR2 697 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 FAM47BQ8NA70 645 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 SNX19Q92543 992 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 FAM131CQ96AQ9 280 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 PHF12Q96QT6 1004 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 AASDHPPTQ9NRN7 309 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 DNAJB9Q9UBS3 223 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 ACSL5Q9ULC5 683 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 EXO1Q9UQ84 846 aaKnown RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 PCDHB11Q9Y5F2 797 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 PLRG1O43660 514 aaKnown RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 H6PDO95479 791 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 TFAP2AP05549 437 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 MYF6P23409 242 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 RPL10P27635 214 aaKnown RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 RPL5P46777 297 aaKnown RBP17.43■□□□□ 0.38
SMPD3-211ENST00000568373 CLCNKAP51800 687 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 DMPKQ09013 629 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 SGCGQ13326 291 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 CYP2A13Q16696 494 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 TMEM196Q5HYL7 178 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 CHRDL2Q6WN34 429 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 KRT78Q8N1N4 520 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 GABRG3Q99928 467 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 MENTQ9BUN1 341 aa17.43■□□□□ 0.38
SMPD3-211ENST00000568373 ACAT2Q9BWD1 397 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms