RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SLC19A1P41440 591 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 DPP6P42658 865 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 SLC7A2P52569 658 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 HNRNPFP52597 415 aaKnown RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 EEFSECP57772 596 aaKnown RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 NHLH1Q02575 133 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 LRRC74AQ0VAA2 488 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 BNIP2Q12982 314 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 FLOT2Q14254 428 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 TRIM25Q14258 630 aaKnown RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 KIR2DS3Q14952 304 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 PAGE3Q5JUK9 113 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 PAGE2Q7Z2X7 111 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 TAF8Q7Z7C8 310 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 METTL4Q8N3J2 472 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 RNF175Q8N4F7 328 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 C1orf52Q8N6N3 182 aaKnown RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 OR2A1Q8NGT9 310 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 CCL4L1Q8NHW4 92 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 ASB9Q96DX5 294 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 C11orf24Q96F05 449 aaPredicted RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 ITCHQ96J02 903 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 QRFPRQ96P65 431 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 TSSK3Q96PN8 268 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 OR52E6Q96RD3 313 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 TRIM15Q9C019 465 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 MUC13Q9H3R2 512 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 TAAR2Q9P1P5 351 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 ZNF624Q9P2J8 865 aaPredicted RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 CD300AQ9UGN4 299 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 WBP11Q9Y2W2 641 aaKnown RBP13.24□□□□□ -0.29
TPM1-215ENST00000558868 PCDHGA2Q9Y5H1 932 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 ZDBF2Q9HCK1 2354 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 CACNA1BQ00975 2339 aa13.24□□□□□ -0.29
TPM1-215ENST00000558868 GNG14A0A1W2PPG7 69 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 H7BY64 318 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 FXYD1O00168 92 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 PCDH7O60245 1069 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 ERN1O75460 977 aaKnown RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 CLEC3AO75596 197 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 BCAS2O75934 225 aaPredicted RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 FKBP9O95302 570 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 EML2O95834 649 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 TGFB1P01137 390 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 CHRM5P08912 532 aaPredicted RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 HSD17B1P14061 328 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 DDX5P17844 614 aaKnown RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 SLC6A2P23975 617 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 GSTM5P46439 218 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 PXNP49023 591 aaPredicted RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 DGKQP52824 942 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 CSNK1G2P78368 415 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 MEF2AQ02078 507 aaPredicted RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 PLCL1Q15111 1095 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 RCN1Q15293 331 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 ELOCQ15369 112 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 SF1Q15637 639 aaKnown RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 SPANXN4Q5MJ08 99 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 SLC2A7Q6PXP3 512 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 R3HCC1LQ7Z5L2 792 aaKnown RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 ADCK2Q7Z695 626 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 GPR180Q86V85 440 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 RIMKLAQ8IXN7 391 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 KRTCAP2Q8N6L1 136 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 EFCAB3Q8N7B9 438 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 FRMD1Q8N878 549 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 OR2L3Q8NG85 312 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 CLHC1Q8NHS4 586 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 TMEM74Q96NL1 305 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 PRAP1Q96NZ9 151 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 CUEDC1Q9NWM3 386 aaPredicted RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 STX18Q9P2W9 335 aaKnown RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 STOML1Q9UBI4 398 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 APOBEC3BQ9UH17 382 aaKnown RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 MCM8Q9UJA3 840 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 PNMA8BQ9ULN7 279 aaPredicted RBP13.23□□□□□ -0.29
TPM1-215ENST00000558868 PCM1Q15154 2024 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 LRP4O75096 1905 aa13.23□□□□□ -0.29
TPM1-215ENST00000558868 CCDC163A0A0D9SF12 145 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 A0A1W2PR77 199 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 ISM1B1AKI9 464 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 TLR4O00206 839 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 OR1F1O43749 312 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 KRT36O76013 467 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 ETHE1O95571 254 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 JUNDP17535 347 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 TACR1P25103 407 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 PSMB5P28074 263 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 HOXA6P31267 233 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 KIR3DL1P43629 444 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 RAE1P78406 368 aaKnown RBP13.22□□□□□ -0.29
TPM1-215ENST00000558868 ZNF763Q0D2J5 394 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 CCNIQ14094 377 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 CAPRIN1Q14444 709 aaKnown RBP13.22□□□□□ -0.29
TPM1-215ENST00000558868 PGS1Q32NB8 556 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 TMEM35AQ53FP2 167 aa13.22□□□□□ -0.29
TPM1-215ENST00000558868 PRRT3Q5FWE3 981 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms