RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 HNRNPA1L2Q32P51 320 aaKnown RBP16.79■□□□□ 0.28
PTPN21-208ENST00000556564 C11orf88Q6PI97 169 aa16.79■□□□□ 0.28
PTPN21-208ENST00000556564 PTCHD1Q96NR3 888 aa16.79■□□□□ 0.28
PTPN21-208ENST00000556564 RBM4BQ9BQ04 359 aaKnown RBP16.79■□□□□ 0.28
PTPN21-208ENST00000556564 RBM4Q9BWF3 364 aaKnown RBP16.79■□□□□ 0.28
PTPN21-208ENST00000556564 MKKSQ9NPJ1 570 aaPredicted RBP16.79■□□□□ 0.28
PTPN21-208ENST00000556564 TMED5Q9Y3A6 229 aa16.79■□□□□ 0.28
PTPN21-208ENST00000556564 HNRNPCP07910 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 DSC1Q08554 894 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 MOGSQ13724 837 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 ZNF311Q5JNZ3 666 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 YTHDF3Q7Z739 585 aaKnown RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CEP97Q8IW35 865 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 PHOSPHO1Q8TCT1 267 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 ZNF689Q96CS4 500 aaPredicted RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 NSUN5Q96P11 429 aaKnown RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 TRAPPC9Q96Q05 1148 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CPEB1Q9BZB8 566 aaKnown RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CSNK1G1Q9HCP0 422 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CPSF4LA6NMK7 179 aaKnown RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 SLC16A5O15375 505 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 C1GALT1C1LP0DN25 315 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 GFOD2Q3B7J2 385 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 UBAP2Q5T6F2 1119 aaKnown RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 ZDHHC14Q8IZN3 488 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 GIPC3Q8TF64 312 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 LRTOMTQ8WZ04 291 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 HSPA12BQ96MM6 686 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 ZNF778Q96MU6 729 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 DLGAP4Q9Y2H0 992 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 C15orf41Q9Y2V0 281 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 SPO11Q9Y5K1 396 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 MAGEB3O15480 346 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 FADS2O95864 444 aaKnown RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 PDYNP01213 254 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 RAB41Q5JT25 222 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 HERPUD2Q9BSE4 406 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 PCDH10Q9P2E7 1040 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 BCKDKO14874 412 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CAPN5O15484 640 aaPredicted RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 SLC30A8Q8IWU4 369 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 PQLC1Q8N2U9 271 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CSNK1A1LQ8N752 337 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 COQ7Q99807 217 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 OSBPL11Q9BXB4 747 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 ADAMDEC1O15204 470 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 TLX3O43711 291 aaPredicted RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CD6P30203 668 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 CLCN4P51793 760 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 DLG1Q12959 904 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 MZT2AQ6P582 158 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 OR4C6Q8NH72 309 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 TSEN15Q8WW01 171 aaKnown RBP16.78■□□□□ 0.28
PTPN21-208ENST00000556564 MAU2Q9Y6X3 613 aa16.78■□□□□ 0.28
PTPN21-208ENST00000556564 DRGXA6NNA5 263 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 ALOX12P18054 663 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 TARDBPQ13148 414 aaKnown RBP eCLIP16.77■□□□□ 0.28
PTPN21-208ENST00000556564 RSBN1Q5VWQ0 802 aaPredicted RBP16.77■□□□□ 0.28
PTPN21-208ENST00000556564 AAGABQ6PD74 315 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 CEACAM20Q6UY09 585 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 HSD11B1LQ7Z5J1 315 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 ARL10Q8N8L6 244 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 WBP1LQ9NX94 342 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 CXXC1Q9P0U4 656 aaPredicted RBP16.77■□□□□ 0.28
PTPN21-208ENST00000556564 MRPS7Q9Y2R9 242 aaKnown RBP16.77■□□□□ 0.28
PTPN21-208ENST00000556564 IQCMA0A1B0GVH7 501 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 CENPXA8MT69 81 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 H0YGN5 161 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 GJB3O75712 270 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 HMGCLP35914 325 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 TRIM25Q14258 630 aaKnown RBP16.77■□□□□ 0.28
PTPN21-208ENST00000556564 TIMM50Q3ZCQ8 353 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 PARS2Q7L3T8 475 aaKnown RBP16.77■□□□□ 0.28
PTPN21-208ENST00000556564 C12orf40Q86WS4 652 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 PLXDC1Q8IUK5 500 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 MFSD6LQ8IWD5 586 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 DOK4Q8TEW6 326 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 TRNT1Q96Q11 434 aaKnown RBP16.77■□□□□ 0.28
PTPN21-208ENST00000556564 SLC26A3P40879 764 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 DEFB110Q30KQ9 67 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 DEFB134Q4QY38 66 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 SLC22A15Q8IZD6 547 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 GPER1Q99527 375 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 PBX4Q9BYU1 374 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 AP4B1Q9Y6B7 739 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 MYH10P35580 1976 aa16.77■□□□□ 0.28
PTPN21-208ENST00000556564 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 MAPK11Q15759 364 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 TMEM31Q5JXX7 168 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 ARMC4Q5T2S8 1044 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 TIFABQ6ZNK6 161 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 TMEFF1Q8IYR6 380 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 TSPAN14Q8NG11 270 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 ARHGEF3Q9NR81 526 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 AGR2O95994 175 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 C18orf21Q32NC0 220 aaPredicted RBP16.77■□□□□ 0.27
PTPN21-208ENST00000556564 NRROSQ86YC3 692 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 SPATA9Q9BWV2 254 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 SDHAF3Q9NRP4 125 aa16.77■□□□□ 0.27
PTPN21-208ENST00000556564 GEMIN8Q9NWZ8 242 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms