RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 GOLGA4Q13439 2230 aaKnown RBP20.34■□□□□ 0.85
VRK2-201ENST00000340157 SAP18O00422 153 aaKnown RBP20.34■□□□□ 0.85
VRK2-201ENST00000340157 BTN3A3O00478 584 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 NME4O00746 187 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 KLHL18O94889 574 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 PGRP06401 933 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 ME2P23368 584 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 UBE2IP63279 158 aaKnown RBP20.34■□□□□ 0.85
VRK2-201ENST00000340157 ZXDAP98168 799 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 SPIN4Q56A73 249 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 PRRT3Q5FWE3 981 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 SLC15A3Q8IY34 581 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 NAGSQ8N159 534 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 SLC13A3Q8WWT9 602 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 GFM2Q969S9 779 aaKnown RBP20.34■□□□□ 0.85
VRK2-201ENST00000340157 HOPXQ9BPY8 73 aaPredicted RBP20.34■□□□□ 0.85
VRK2-201ENST00000340157 TM9SF3Q9HD45 589 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 CMTM6Q9NX76 183 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 THADAQ6YHU6 1953 aa20.34■□□□□ 0.85
VRK2-201ENST00000340157 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 TRIM38O00635 465 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 LCMT2O60294 686 aaKnown RBP20.33■□□□□ 0.85
VRK2-201ENST00000340157 JUNDP17535 347 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 RACK1P63244 317 aaKnown RBP20.33■□□□□ 0.85
VRK2-201ENST00000340157 CYP4F2P78329 520 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 FOXM1Q08050 763 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 GPR18Q14330 331 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 GALNT18Q6P9A2 607 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 COMMD6Q7Z4G1 85 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 TAF8Q7Z7C8 310 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 PLD3Q8IV08 490 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 TMEFF1Q8IYR6 380 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 WDR48Q8TAF3 677 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 FLVCR1-AS1Q8TAF5 88 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 TESCQ96BS2 214 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 NT5DC2Q9H857 520 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 SIRT5Q9NXA8 310 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 APOBEC3BQ9UH17 382 aaKnown RBP20.33■□□□□ 0.85
VRK2-201ENST00000340157 PCDHA9Q9Y5H5 950 aa20.33■□□□□ 0.85
VRK2-201ENST00000340157 H0Y3Z8 333 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 ACOT8O14734 319 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 PSMG1O95456 288 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 B3GALT4O96024 378 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 IL6P05231 212 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 HOXB3P14651 431 aaPredicted RBP20.33■□□□□ 0.84
VRK2-201ENST00000340157 TCN1P20061 433 aaPredicted RBP20.33■□□□□ 0.84
VRK2-201ENST00000340157 CXCR2P25025 360 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 TIA1P31483 386 aaKnown RBP eCLIP20.33■□□□□ 0.845e-6■■■■□ 20.5
VRK2-201ENST00000340157 C6orf163Q5TEZ5 329 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 KIAA1614Q5VZ46 1190 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 TSSK4Q6SA08 328 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 DHDDSQ86SQ9 333 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 DCP2Q8IU60 420 aaKnown RBP20.33■□□□□ 0.84
VRK2-201ENST00000340157 SYT12Q8IV01 421 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 ENDOVQ8N8Q3 282 aaKnown RBP20.33■□□□□ 0.84
VRK2-201ENST00000340157 SLC37A2Q8TED4 501 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 GTF2H4Q92759 462 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 TMEM125Q96AQ2 219 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 SPACA7Q96KW9 195 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 MIR1-1HGQ9H1L0 117 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 MRPS30Q9NP92 439 aaKnown RBP20.33■□□□□ 0.84
VRK2-201ENST00000340157 CPNE7Q9UBL6 633 aa20.33■□□□□ 0.84
VRK2-201ENST00000340157 TLR4O00206 839 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 KDM1AO60341 852 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 CTSEP14091 401 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 CLNS1AP54105 237 aaKnown RBP20.32■□□□□ 0.84
VRK2-201ENST00000340157 PLIN5Q00G26 463 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 UGT8Q16880 541 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 IQCHQ86VS3 1027 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 FAM9CQ8IZT9 166 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 METTL4Q8N3J2 472 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 DNAJB14Q8TBM8 379 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 MS4A8Q9BY19 250 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 PITHD1Q9GZP4 211 aaPredicted RBP20.32■□□□□ 0.84
VRK2-201ENST00000340157 SRMSQ9H3Y6 488 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 SYNPO2LQ9H987 977 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 PRM3Q9NNZ6 103 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 L3MBTL1Q9Y468 752 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 SDK1Q7Z5N4 2213 aa20.32■□□□□ 0.84
VRK2-201ENST00000340157 TECTAO75443 2155 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 AKAP10O43572 662 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 PCDH7O60245 1069 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 CSF2P04141 144 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 ANXA4P09525 319 aaPredicted RBP20.31■□□□□ 0.84
VRK2-201ENST00000340157 BLKP51451 505 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 C21orf58P58505 322 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 RABL3Q5HYI8 236 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 PRMT9Q6P2P2 845 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 SLC36A4Q6YBV0 504 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 MAMSTRQ6ZN01 415 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 ADCK2Q7Z695 626 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 IER2Q9BTL4 223 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 DPH7Q9BTV6 452 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 SORBS1Q9BX66 1292 aaKnown RBP20.31■□□□□ 0.84
VRK2-201ENST00000340157 ZNF717Q9BY31 904 aaPredicted RBP20.31■□□□□ 0.84
VRK2-201ENST00000340157 EXO1Q9UQ84 846 aaKnown RBP20.31■□□□□ 0.84
VRK2-201ENST00000340157 KLHL20Q9Y2M5 609 aa20.31■□□□□ 0.84
VRK2-201ENST00000340157 NUP214P35658 2090 aaPredicted RBP20.31■□□□□ 0.84
VRK2-201ENST00000340157 OR1F1O43749 312 aa20.3■□□□□ 0.84
VRK2-201ENST00000340157 GBAP04062 536 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms