RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TLL1O43897 1013 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 NOS1APO75052 506 aaPredicted RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 CCNYL3P0C7X3 344 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 MAPK8P45983 427 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 POLR2LP62875 67 aaKnown RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 SF3B4Q15427 424 aaKnown RBP eCLIP10.22□□□□□ -0.774e-17■■■■■ 82.4
USB1-212ENST00000566082 FAM110CQ1W6H9 321 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 ZNF691Q5VV52 312 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 SHQ1Q6PI26 577 aaKnown RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 Q6ZPB1 254 aaPredicted RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 Q6ZSR9 355 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 B3GNT8Q7Z7M8 397 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 RAB42Q8N4Z0 105 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 GTF2H4Q92759 462 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 MAL2Q969L2 176 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 POLR2J3Q9H1A7 115 aaKnown RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 OSGEPL1Q9H4B0 414 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 CCDC177Q9NQR7 707 aaPredicted RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 RAD18Q9NS91 495 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 HECAQ9UBI9 543 aaPredicted RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 HSPB11Q9Y547 144 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 PCDHGB6Q9Y5F9 930 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 SSNA1O43805 119 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 ERAL1O75616 437 aaKnown RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 UGT2B17O75795 530 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 MTHFD2P13995 350 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 FSHRP23945 695 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 PSMD8P48556 350 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 CREMQ03060 361 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 SCARB2Q14108 478 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 USP41Q3LFD5 358 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 NOXRED1Q6NXP6 359 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 CDC73Q6P1J9 531 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 SPATC1Q76KD6 591 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 CLECL1Q8IZS7 167 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 CRELD1Q96HD1 420 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 TEFMQ96QE5 360 aaKnown RBP10.22□□□□□ -0.77
USB1-212ENST00000566082 BOCQ9BWV1 1114 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 ACOT13Q9NPJ3 140 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 KLHL28Q9NXS3 571 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 GPRC5BQ9NZH0 403 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 GULP1Q9UBP9 304 aa10.22□□□□□ -0.77
USB1-212ENST00000566082 TSPAN9O75954 239 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 APOL3O95236 402 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 LRG1P02750 347 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 PAX3P23760 479 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 SDC2P34741 201 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 ANXA11P50995 505 aaKnown RBP10.21□□□□□ -0.77
USB1-212ENST00000566082 TARDBPQ13148 414 aaKnown RBP eCLIP10.21□□□□□ -0.77
USB1-212ENST00000566082 MAD2L1BPQ15013 274 aaPredicted RBP10.21□□□□□ -0.77
USB1-212ENST00000566082 OXA1LQ15070 435 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 ELMSAN1Q6PJG2 1045 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 PRSS55Q6UWB4 352 aaPredicted RBP10.21□□□□□ -0.77
USB1-212ENST00000566082 C16orf62Q7Z3J2 963 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 PTRH1Q86Y79 214 aaKnown RBP10.21□□□□□ -0.77
USB1-212ENST00000566082 RAVER1Q8IY67 606 aaKnown RBP10.21□□□□□ -0.77
USB1-212ENST00000566082 C7orf57Q8NEG2 295 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 NFKBIDQ8NI38 313 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 UBE2FQ969M7 185 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 SLC38A2Q96QD8 506 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 SLC35A5Q9BS91 424 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 AMBRA1Q9C0C7 1298 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 UCKL1Q9NWZ5 548 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 ABCG2Q9UNQ0 655 aa10.21□□□□□ -0.77
USB1-212ENST00000566082 NUP214P35658 2090 aaPredicted RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 A0A1B0GTL3 188 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 PRR23AA6NEV1 266 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 PCDH7O60245 1069 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 MPZL2O60487 215 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 NME6O75414 186 aaPredicted RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 CNMDO75829 334 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 PTTG1O95997 202 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 RETP07949 1114 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 AAK1Q2M2I8 961 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 SETMARQ53H47 684 aaPredicted RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 AGAP7PQ5VUJ5 663 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 SDE2Q6IQ49 451 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 DHRS4L2Q6PKH6 230 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 CACUL1Q86Y37 369 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 PCSK9Q8NBP7 692 aaKnown RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 HMGCLL1Q8TB92 370 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 ARRDC2Q8TBH0 407 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 BPIFB1Q8TDL5 484 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 EFHD2Q96C19 240 aaPredicted RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 EGLN2Q96KS0 407 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 SLC29A3Q9BZD2 475 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 GORASP2Q9H8Y8 452 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 UTS2RQ9UKP6 389 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 ADAMTSL1Q8N6G6 1762 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 TRBC2A0A5B9 178 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 AGAP5A6NIR3 686 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 WBP4O75554 376 aaKnown RBP10.21□□□□□ -0.78
USB1-212ENST00000566082 AP1S1P61966 158 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 PTPRRQ15256 657 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 PROX2Q3B8N5 592 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 GPAT3Q53EU6 434 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 ERAP2Q6P179 960 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 ZSWIM9Q86XI8 627 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 TMEM151AQ8N4L1 468 aa10.21□□□□□ -0.78
USB1-212ENST00000566082 ZNF671Q8TAW3 534 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms