RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 OR4N4Q8N0Y3 316 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 PPFIBP2Q8ND30 876 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 CPT1CQ8TCG5 803 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 PPP4R1Q8TF05 950 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 MMABQ96EY8 250 aaPredicted RBP15.93■□□□□ 0.14
USB1-211ENST00000565662 AGAP4Q96P64 663 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 TRIM31Q9BZY9 425 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 LHPPQ9H008 270 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 CLK4Q9HAZ1 481 aaKnown RBP15.93■□□□□ 0.14
USB1-211ENST00000565662 TRPC4Q9UBN4 977 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 CTSFQ9UBX1 484 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 FBXL4Q9UKA2 621 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 B3GNT3Q9Y2A9 372 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 HS3ST3B1Q9Y662 390 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 MED13Q9UHV7 2174 aa15.93■□□□□ 0.14
USB1-211ENST00000565662 MYO18BQ8IUG5 2567 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 SYNDIG1LA6NDD5 238 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 HAT1O14929 419 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 CNOT3O75175 753 aaKnown RBP15.92■□□□□ 0.14
USB1-211ENST00000565662 CTSBP07858 339 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 NR1D1P20393 614 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 GABRB3P28472 473 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 RPL21P46778 160 aaKnown RBP15.92■□□□□ 0.14
USB1-211ENST00000565662 OR1D4P47884 311 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 CDKN2DP55273 166 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 POU4F1Q01851 419 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 KLC1Q07866 573 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 NAB1Q13506 487 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 NAE1Q13564 534 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 HERC3Q15034 1050 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 JMJD6Q6NYC1 403 aaPredicted RBP15.92■□□□□ 0.14
USB1-211ENST00000565662 FRA10AC1Q70Z53 315 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 CCDC91Q7Z6B0 441 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 ZC3HC1Q86WB0 502 aaKnown RBP15.92■□□□□ 0.14
USB1-211ENST00000565662 TCAIMQ8N3R3 496 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 ABHD11Q8NFV4 315 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 OR56A3Q8NH54 315 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 CPNE1Q99829 537 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 CAPS2Q9BXY5 557 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 SOX17Q9H6I2 414 aaPredicted RBP15.92■□□□□ 0.14
USB1-211ENST00000565662 C3orf18Q9UK00 162 aa15.92■□□□□ 0.14
USB1-211ENST00000565662 UBR5O95071 2799 aaPredicted RBP15.91■□□□□ 0.14
USB1-211ENST00000565662 CCDC88CQ9P219 2028 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 FAM95CA0A1B0GW59 222 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 KRT87PA6NCN2 255 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 A6NL46 340 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 H7BY64 318 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 SOCS6O14544 535 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 BANF1O75531 89 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 TSPAN12O95859 305 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 PDGFAP04085 211 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 TUBB4AP04350 444 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 HEXBP07686 556 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 MYBL2P10244 700 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 RGS1Q08116 209 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 PWP1Q13610 501 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 CDKL4Q5MAI5 379 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 B3GNTL1Q67FW5 361 aaPredicted RBP15.91■□□□□ 0.14
USB1-211ENST00000565662 SLC6A19Q695T7 634 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 ASPGQ86U10 573 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 IGDCC3Q8IVU1 814 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 TTLQ8NG68 377 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 METTL21AQ8WXB1 218 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 SEC16BQ96JE7 1060 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 PRAP1Q96NZ9 151 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 ILKAPQ9H0C8 392 aaPredicted RBP15.91■□□□□ 0.14
USB1-211ENST00000565662 ANKHQ9HCJ1 492 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 ADAMTS6Q9UKP5 1117 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 DYRK1BQ9Y463 629 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 SLC22A7Q9Y694 548 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 KCNE2Q9Y6J6 123 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 MAU2Q9Y6X3 613 aa15.91■□□□□ 0.14
USB1-211ENST00000565662 NSG1A0A0A6YYJ2 146 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 CCDC189A1A4V9 331 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 IDSB3KWA1 339 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 K7EM74 188 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 STX2P32856 288 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 AHRP35869 848 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 AGTR2P50052 363 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 EMP2P54851 167 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 CSNK1G2P78368 415 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 TIAL1Q01085 375 aaKnown RBP eCLIP15.9■□□□□ 0.14
USB1-211ENST00000565662 CSHL1Q14406 222 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 HKDC1Q2TB90 917 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 TRMT10BQ6PF06 316 aaKnown RBP15.9■□□□□ 0.14
USB1-211ENST00000565662 KIRREL2Q6UWL6 708 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 NDUFAF7Q7L592 441 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 ZNF572Q7Z3I7 529 aaPredicted RBP15.9■□□□□ 0.14
USB1-211ENST00000565662 ANKMY2Q8IV38 441 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 KBTBD2Q8IY47 623 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 OR11G2Q8NGC1 345 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 OR1F2PQ96R84 312 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 WDR77Q9BQA1 342 aaPredicted RBP15.9■□□□□ 0.14
USB1-211ENST00000565662 PITHD1Q9GZP4 211 aaPredicted RBP15.9■□□□□ 0.14
USB1-211ENST00000565662 TSPYL1Q9H0U9 437 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 ZNF552Q9H707 407 aaPredicted RBP15.9■□□□□ 0.14
USB1-211ENST00000565662 CNOT10Q9H9A5 744 aaKnown RBP15.9■□□□□ 0.14
USB1-211ENST00000565662 PELI2Q9HAT8 420 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 GPAMQ9HCL2 828 aa15.9■□□□□ 0.14
USB1-211ENST00000565662 ABCF3Q9NUQ8 709 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms