RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 NEK11Q8NG66 645 aa6.71□□□□□ -1.34
NUP54-215ENST00000514313 TBC1D31Q96DN5 1066 aa6.71□□□□□ -1.34
NUP54-215ENST00000514313 RUNDC3BQ96NL0 473 aa6.71□□□□□ -1.34
NUP54-215ENST00000514313 RUFY1Q96T51 708 aa6.71□□□□□ -1.34
NUP54-215ENST00000514313 UBQLN3Q9H347 655 aa6.71□□□□□ -1.34
NUP54-215ENST00000514313 PDRG1Q9NUG6 133 aa6.71□□□□□ -1.34
NUP54-215ENST00000514313 IGLV9-49A0A0B4J1Y8 123 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 FAM149AA5PLN7 773 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 ANKDD1BA6NHY2 528 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 C2CD4DB7Z1M9 353 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 NPIPA3F8WFD2 350 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 H3BMM5 538 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 ACSL4O60488 711 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 GP1BBP13224 206 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 CD59P13987 128 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 LIFP15018 202 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 LHCGRP22888 699 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 SFTPDP35247 375 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 CDKN1AP38936 164 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 GLIPR1P48060 266 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 ZXDBP98169 803 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 WASHC5Q12768 1159 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 SQLEQ14534 574 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 IZUMO4Q1ZYL8 232 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 SLC25A53Q5H9E4 307 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 FOXL2NBQ6ZUU3 175 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 KBTBD8Q8NFY9 601 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 OR13A1Q8NGR1 328 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 URGCPQ8TCY9 931 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 NUDCD2Q8WVJ2 157 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 RBM41Q96IZ5 413 aaKnown RBP6.7□□□□□ -1.34
NUP54-215ENST00000514313 DUX5Q96PT3 197 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 FSD1Q9BTV5 496 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 TRMT61BQ9BVS5 477 aaKnown RBP6.7□□□□□ -1.34
NUP54-215ENST00000514313 IDI2Q9BXS1 227 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 RAVER2Q9HCJ3 691 aaKnown RBP6.7□□□□□ -1.34
NUP54-215ENST00000514313 HMG20BQ9P0W2 317 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 TNNQ9UQP3 1299 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 R4GN57 208 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 PFASO15067 1338 aa6.7□□□□□ -1.34
NUP54-215ENST00000514313 SLC9B1P1A6NJY1 282 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 E5RGE8 158 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 INO80B-WBP1J3KQ70 363 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 FPGTO14772 594 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 ATP6V0E1O15342 81 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 STAM2O75886 525 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 TSHBP01222 138 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 GOT1P17174 413 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 MAPK3P27361 379 aaPredicted RBP6.69□□□□□ -1.34
NUP54-215ENST00000514313 THBS3P49746 956 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 LUMP51884 338 aaPredicted RBP6.69□□□□□ -1.34
NUP54-215ENST00000514313 TAF13Q15543 124 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 ACKR1Q16570 336 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 AGAP6Q5VW22 663 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 ISCA2Q86U28 154 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 ZNF575Q86XF7 245 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 SLC13A3Q8WWT9 602 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 EEF2KMTQ96G04 330 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 ALKBH7Q9BT30 221 aaPredicted RBP6.69□□□□□ -1.34
NUP54-215ENST00000514313 RNF121Q9H920 327 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 TAAR2Q9P1P5 351 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 TRMT6Q9UJA5 497 aaKnown RBP6.69□□□□□ -1.34
NUP54-215ENST00000514313 EXOC6BQ9Y2D4 811 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 RPH3AQ9Y2J0 694 aaPredicted RBP6.69□□□□□ -1.34
NUP54-215ENST00000514313 NSG2Q9Y328 171 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 PCDHGB1Q9Y5G3 927 aa6.69□□□□□ -1.34
NUP54-215ENST00000514313 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 IGHV4-38-2P0DP08 117 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 CETPP11597 493 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 CA6P23280 308 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 ALDH4A1P30038 563 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 KEAP1Q14145 624 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 OPCMLQ14982 345 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 STXBP2Q15833 593 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 TECRLQ5HYJ1 363 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 FAM43BQ6ZT52 329 aaPredicted RBP6.68□□□□□ -1.34
NUP54-215ENST00000514313 NFE4Q86UQ8 179 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 TMEM126BQ8IUX1 230 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 METTL27Q8N6F8 245 aaPredicted RBP6.68□□□□□ -1.34
NUP54-215ENST00000514313 SMYD1Q8NB12 490 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 RFT1Q96AA3 541 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 VOPP1Q96AW1 172 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 ALG14Q96F25 216 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 DTD2Q96FN9 168 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 C4orf45Q96LM5 186 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 PRMT1Q99873 361 aaKnown RBP6.68□□□□□ -1.34
NUP54-215ENST00000514313 DDX50Q9BQ39 737 aaKnown RBP6.68□□□□□ -1.34
NUP54-215ENST00000514313 CPVLQ9H3G5 476 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 ECHDC1Q9NTX5 307 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 AGTPBP1Q9UPW5 1226 aa6.68□□□□□ -1.34
NUP54-215ENST00000514313 TRBV5-5A0A0J9YX44 114 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 CCDC69A6NI79 296 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 SLC22A2O15244 555 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 SCO2O43819 266 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 B3GALNT1O75752 331 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 SLC4A1P02730 911 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 ALPPP05187 535 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 FRMD6-AS1P0C7T7 363 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 ALPPL2P10696 532 aa6.67□□□□□ -1.34
NUP54-215ENST00000514313 CLDN17P56750 224 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms