RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 MLYCDO95822 493 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 VTNP04004 478 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 PRSS56P0CW18 603 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 ERVK-10P10266 1014 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 DARSP14868 501 aaKnown RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 CXCL12P48061 93 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 F2RL1P55085 397 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 GNB1P62873 340 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 TMEM115Q12893 351 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 KIR2DS3Q14952 304 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 WTAPQ15007 396 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 DPCR1Q3MIW9 517 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 KRT71Q3SY84 523 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 CEP55Q53EZ4 464 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 TWF2Q6IBS0 349 aaKnown RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 KLHL10Q6JEL2 608 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 ACAD10Q6JQN1 1059 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 LCN10Q6JVE6 187 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 RBMS3Q6XE24 437 aaKnown RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 TPRG1Q6ZUI0 275 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 ANO5Q75V66 913 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 CCDC91Q7Z6B0 441 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 MYPOPQ86VE0 399 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 TMEM173Q86WV6 379 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 APLFQ8IW19 511 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 CNNM3Q8NE01 707 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 RDM1Q8NG50 284 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 OR1J2Q8NGS2 313 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 FGF14Q92915 247 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZUFSPQ96AP4 578 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 INTS12Q96CB8 462 aaKnown RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 STRA6Q9BX79 667 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 SPZ1Q9BXG8 430 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 GCOM2Q9BZD3 368 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 UBN1Q9NPG3 1134 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 MED4Q9NPJ6 270 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 NRBP2Q9NSY0 501 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 CDH7Q9ULB5 785 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 C2CD2Q9Y426 696 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 MTF2Q9Y483 593 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 CLIC4Q9Y696 253 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 CEP295Q9C0D2 2601 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 LAMA1P25391 3075 aa4.45□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZFYVE26Q68DK2 2539 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 DMXL2Q8TDJ6 3036 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 LAMA5O15230 3695 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 A0A0D9SFI3 127 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 EIF4E1BA6NMX2 242 aaKnown RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 ANKRD66B4E2M5 251 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 HIP1O00291 1037 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 IFIT3O14879 490 aaKnown RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 TGFB1I1O43294 461 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 BUD23O43709 281 aaKnown RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 C22orf31O95567 290 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF806P0C7X5 589 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 RDXP35241 583 aaKnown RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 PRCPP42785 496 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 SLC11A1P49279 550 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 GPC3P51654 580 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 OLR1P78380 273 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 LPAL2Q16609 132 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 PNLIPRP3Q17RR3 467 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 C1QTNF12Q5T7M4 302 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 MFSD4BQ5TF39 518 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZC2HC1BQ5TFG8 222 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 LIN9Q5TKA1 542 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 PLXDC2Q6UX71 529 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF497Q6ZNH5 498 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 NIPA1Q7RTP0 329 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 SDCCAG8Q86SQ7 713 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF589Q86UQ0 364 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 LONP2Q86WA8 852 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 HM13Q8TCT9 377 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 TMEM190Q8WZ59 177 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 DNASE1L2Q92874 299 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 FGF13Q92913 245 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 ZNF707Q96C28 371 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 OXNAD1Q96HP4 312 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 LRR1Q96L50 414 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 SEMA3CQ99985 751 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 RPP25Q9BUL9 199 aaKnown RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 AGXT2Q9BYV1 514 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 GLT8D2Q9H1C3 349 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 LMAN1LQ9HAT1 526 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 SCPEP1Q9HB40 452 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 LY9Q9HBG7 655 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 RANGRFQ9HD47 186 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 TBC1D22BQ9NU19 505 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 CRYL1Q9Y2S2 319 aa4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 FLNBO75369 2602 aaKnown RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 DSPP15924 2871 aaKnown RBP4.44□□□□□ -1.7
HMGB3P5-201ENST00000428894 TDRD15B5MCY1 1934 aaKnown RBP4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 A0A0G2JNG1 304 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 ECI2O75521 394 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 NR3C1P04150 777 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 TFAP2AP05549 437 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 CCDC175P0C221 793 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 TDGF1P13385 188 aa4.43□□□□□ -1.7
HMGB3P5-201ENST00000428894 MSH3P20585 1137 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms