RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 RPS3AP61247 264 aaKnown RBP16.9■□□□□ 0.3
PTPRU-202ENST00000373779 CLCA4Q14CN2 919 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 ZNF630Q2M218 657 aaPredicted RBP16.9■□□□□ 0.3
PTPRU-202ENST00000373779 ZNF280BQ86YH2 543 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 SLC27A6Q9Y2P4 619 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 HLA-DQA2P01906 255 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 KLK1P06870 262 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 HTR6P50406 440 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 GRM2Q14416 872 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 MBOAT1Q6ZNC8 495 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 ALDH16A1Q8IZ83 802 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 LGALS12Q96DT0 336 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 ALPK1Q96QP1 1244 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 PTPN18Q99952 460 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 SYNDIG1Q9H7V2 258 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 TMEM138Q9NPI0 162 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 CTPS2Q9NRF8 586 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 TMLHEQ9NVH6 421 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 NKIRAS2Q9NYR9 191 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 BCHEP06276 602 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 RPP38P78345 283 aaKnown RBP16.9■□□□□ 0.3
PTPRU-202ENST00000373779 SIX5Q8N196 739 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 ZSCAN5AQ9BUG6 496 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 MARCH7Q9H992 704 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 ITM2CQ9NQX7 267 aa16.9■□□□□ 0.3
PTPRU-202ENST00000373779 BIKQ13323 160 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 AGTRAPQ6RW13 159 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 ARHGAP12Q8IWW6 846 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 LILRA2Q8N149 483 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 DTWD1Q8N5C7 304 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 ANKLE1Q8NAG6 615 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 GPR150Q8NGU9 434 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 C3orf30Q96M34 536 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 CCM2Q9BSQ5 444 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 PCBD2Q9H0N5 130 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 RETREG1Q9H6L5 497 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 HCN4Q9Y3Q4 1203 aa16.89■□□□□ 0.3
PTPRU-202ENST00000373779 CTNNB1P35222 781 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 TMEM44Q2T9K0 475 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 OR8H1Q8NGG4 311 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 IST1P53990 364 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 PRKCZQ05513 592 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 SLC36A3Q495N2 470 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 LSMEM2Q8N112 164 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 IL1RAPQ9NPH3 570 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 FBXW2Q9UKT8 454 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 HSPE1-MOB4S4R3N1 261 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 HIST1H2ABP04908 130 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 PCCBP05166 539 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 SLC5A2P31639 672 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 KDELR2P33947 212 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 SLC11A1P49279 550 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 DGKEP52429 567 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF181Q2M3W8 571 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 HIST3H2AQ7L7L0 130 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 CARM1Q86X55 608 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 HIST1H2ACQ93077 130 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 TMEM175Q9BSA9 504 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 PHF11Q9UIL8 331 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 RIMKLBQ9ULI2 386 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 OR10H1Q9Y4A9 318 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 PCDHGA10Q9Y5H3 936 aa16.89■□□□□ 0.29
PTPRU-202ENST00000373779 ISPDA4D126 451 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 PRMT3O60678 531 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 C6orf47O95873 294 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 SLC2A2P11168 524 aaPredicted RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 LAMP2P13473 410 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ACRV1P26436 265 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 PLA2G16P53816 162 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 RPS13P62277 151 aaKnown RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF311Q5JNZ3 666 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 GPRC6AQ5T6X5 926 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 HLA-DQA1Q5Y7H0 255 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ANKRD13BQ86YJ7 626 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 TMEM203Q969S6 136 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 MS4A12Q9NXJ0 267 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 HMX2A2RU54 273 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 C7orf72A4D263 438 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ZNF623O75123 536 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 CAP1Q01518 475 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 PHPT1Q9NRX4 125 aaPredicted RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 TMEM45AQ9NWC5 275 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 CCDC59Q9P031 241 aaKnown RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 MYH9P35579 1960 aaKnown RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 BTAF1O14981 1849 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 RIIAD1A6NNX1 92 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 RCAN2Q14206 197 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 KCTD11Q693B1 232 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 TXNDC8Q6A555 127 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 TMEM102Q8N9M5 508 aaPredicted RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 PHC3Q8NDX5 983 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 TP53INP1Q96A56 240 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 NARS2Q96I59 477 aaKnown RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 P2RX2Q9UBL9 471 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 FUOMA2VDF0 154 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 KELP23276 732 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 ST3GAL4Q11206 333 aa16.88■□□□□ 0.29
PTPRU-202ENST00000373779 C18orf21Q32NC0 220 aaPredicted RBP16.88■□□□□ 0.29
PTPRU-202ENST00000373779 BRAT1Q6PJG6 821 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms