RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 STEAP4Q687X5 459 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 HACD2Q6Y1H2 254 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 PRR23CQ6ZRP0 262 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 ZCCHC10Q8TBK6 192 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 C5orf34Q96MH7 638 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 LGR4Q9BXB1 951 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 PCBD2Q9H0N5 130 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 IFT46Q9NQC8 304 aa13.81□□□□□ -0.2
COL1A2-201ENST00000297268 RGS17Q9UGC6 210 aaPredicted RBP13.81□□□□□ -0.2
COL1A2-201ENST00000297268 TRBV23OR9-2A0A075B6M9 112 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 A0A1B0GVG6 124 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CD1DP15813 335 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 AP1S2P56377 157 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 UNC50Q53HI1 259 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 PRPF38BQ5VTL8 546 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CCDC28AQ8IWP9 274 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 NPAS3Q8IXF0 933 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CLDN19Q8N6F1 224 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 ZNF615Q8N8J6 731 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 COX18Q8N8Q8 333 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CMTM7Q96FZ5 175 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 ZSWIM3Q96MP5 696 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 RC3H2Q9HBD1 1191 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D14Q9P2M4 693 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 RHCGQ9UBD6 479 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 SEC14L4Q9UDX3 406 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CYTH4Q9UIA0 394 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 KAT6AQ92794 2004 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 LTN1O94822 1766 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 OR2AT4A6NND4 320 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 ANKRD66B4E2M5 251 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 DDX6P26196 483 aaKnown RBP eCLIP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 LEPRP48357 1165 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 JAG1P78504 1218 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 ZDHHC14Q8IZN3 488 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 NKD1Q969G9 470 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 C12orf42Q96LP6 360 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 SMOQ99835 787 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 FAM118AQ9NWS6 357 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 FMN2Q9NZ56 1722 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 MYH10P35580 1976 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3DA0A087WVF3 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3IA0A087WXS9 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3EA0A087X179 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3KA0A087X1G2 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 KANTRA0A1W2PQU2 76 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3FA6NER0 549 aaPredicted RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3LB9A6J9 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 MTX2O75431 263 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CH25HO95992 272 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3HP0C7X1 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 GNALP38405 381 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CEBPGP53567 150 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 PPP3R1P63098 170 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3GQ6DHY5 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3CQ6IPX1 549 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CMTR2Q8IYT2 770 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TBC1D3Q8IZP1 549 aaPredicted RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 LSM14AQ8ND56 463 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 CD244Q9BZW8 370 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 XYLT2Q9H1B5 865 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 PCDHGB7Q9Y5F8 929 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 FXYD6-FXYD2A0A087WZ82 144 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 EEDO75530 441 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 SLC35G6P0C7Q6 338 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TFPIP10646 304 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 S100GP29377 79 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 PPM1AP35813 382 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 GNG2P59768 71 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 C1QTNF8P60827 252 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 STXBP1P61764 594 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TSPAN5P62079 268 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 OR52E8Q6IFG1 317 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 ANKRD26P1Q6NSI1 321 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 ZNF367Q7RTV3 350 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 THOC6Q86W42 341 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 NUDT13Q86X67 352 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 DNAJA4Q8WW22 397 aaPredicted RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 TMEM246Q9BRR3 403 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 FUZQ9BT04 418 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 SEZ6LQ9BYH1 1024 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 FXYD6Q9H0Q3 95 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 OR2AG1Q9H205 316 aa13.8□□□□□ -0.2
COL1A2-201ENST00000297268 RBM7Q9Y580 266 aaKnown RBP13.8□□□□□ -0.2
COL1A2-201ENST00000297268 A0A0G2JPF8 293 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 PRSS51A0A1B0GVH4 220 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 FUOMA2VDF0 154 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 HNRNPCL3B7ZW38 293 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 FAM72CH0Y354 149 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 MATN4O95460 622 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 RB1P06400 928 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 HNRNPCL4P0DMR1 293 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 RPL17P18621 184 aaKnown RBP13.79□□□□□ -0.2
COL1A2-201ENST00000297268 HK1P19367 917 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 SLC3A1Q07837 685 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 FAM72AQ5TYM5 149 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 FAM72DQ6L9T8 149 aa13.79□□□□□ -0.2
COL1A2-201ENST00000297268 CCBE1Q6UXH8 406 aaPredicted RBP13.79□□□□□ -0.2
COL1A2-201ENST00000297268 CEACAM20Q6UY09 585 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms