RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 WFIKKN2Q8TEU8 576 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 SMARCD2Q92925 531 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 CLDN23Q96B33 292 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PAGE5Q96GU1 130 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MSANTD3Q96H12 275 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 ANKRD36BP1Q96IX9 119 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 C3orf30Q96M34 536 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF385AQ96PM9 386 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PKMYT1Q99640 499 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 SH3GL2Q99962 352 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 RPP25Q9BUL9 199 aaKnown RBP3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MFSD1Q9H3U5 465 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TBC1D17Q9HA65 648 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 KIF9Q9HAQ2 790 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZFP14Q9HCL3 533 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MMP25Q9NPA2 562 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 AGPAT3Q9NRZ7 376 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 DMAC2Q9NW81 257 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 IRAK4Q9NWZ3 460 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 SMARCAL1Q9NZC9 954 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 SIX4Q9UIU6 781 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TINAGQ9UJW2 476 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 MKLN1Q9UL63 735 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 PROCRQ9UNN8 238 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 TRAF3IP3Q9Y228 551 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 CEP250Q9BV73 2442 aa3.55□□□□□ -1.84
CKS1BP3-201ENST00000600888 USP34Q70CQ2 3546 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 VPS13AQ96RL7 3174 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PTPRJQ12913 1337 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 A0A1B0GUV1 79 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 A0A1B0GVL5 298 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 KANSL1LA0AUZ9 987 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PLSCR5A0PG75 271 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 GOLGA8IPA6NC78 632 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SHISA7A6NL88 538 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 GOLGA8JA6NMD2 632 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SMTNL1A8MU46 457 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 B4E171 279 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 AKR1B15C9JRZ8 316 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PRSS44E7EML9 344 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CHADO15335 359 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SLC16A5O15375 505 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PI15O43692 258 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 NOL4O94818 638 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 KDM4BO94953 1096 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PMS2P2O95744 297 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 FTCDO95954 541 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TNNC2P02585 160 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 AFPP02771 609 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SPARCP09486 303 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 OR4Q2P0C623 313 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CSH1P0DML2 217 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CSH2P0DML3 217 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 HMGA1P17096 107 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CEBPBP17676 345 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 ATF6P18850 670 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 WARSP23381 471 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CASP1P29466 404 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CDC25CP30307 473 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TSPAN7P41732 249 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PI4KAP42356 2102 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 NDUFA8P51970 172 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 BRWD1-AS2P59051 145 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 RPL10AP62906 217 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 NUCB2P80303 420 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TSPY1Q01534 308 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CYP24A1Q07973 514 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 STK4Q13043 487 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 FRG1Q14331 258 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 BECN1Q14457 450 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 MAPRE1Q15691 268 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 MLF2Q15773 248 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TBCEQ15813 527 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 ZNF528Q3MIS6 628 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 ATP13A5Q4VNC0 1218 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 FAM78AQ5JUQ0 283 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 GGNBP1Q5YKI7 109 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TSSK4Q6SA08 328 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 VITQ6UXI7 678 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SLC36A4Q6YBV0 504 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 KRBA2Q6ZNG9 492 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 C4orf50Q6ZRC1 276 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TMEM150AQ86TG1 271 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CBWD2Q8IUF1 395 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 ARID3BQ8IVW6 561 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CHERPQ8IWX8 916 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 GUF1Q8N442 669 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CSGALNACT2Q8N6G5 542 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 PAF1Q8N7H5 531 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 RBMXL3Q8N7X1 1067 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 OR5B17Q8NGF7 314 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SPATA20Q8TB22 786 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 ING5Q8WYH8 240 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TAF4BQ92750 862 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TANKQ92844 425 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCDC47Q96A33 483 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 SYAP1Q96A49 352 aaPredicted RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 INTS12Q96CB8 462 aaKnown RBP3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 TCEAL4Q96EI5 215 aa3.54□□□□□ -1.84
CKS1BP3-201ENST00000600888 CCDC34Q96HJ3 373 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 240.6 ms