RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SORBS2O94875 1100 aaKnown RBP17.48■□□□□ 0.39
VIM-201ENST00000224237 TNFP01375 233 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 PHEXP78562 749 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 FOXM1Q08050 763 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 MTAPQ13126 283 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ZNF423Q2M1K9 1284 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 WLSQ5T9L3 541 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 SLC30A9Q6PML9 568 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 FAM129CQ86XR2 697 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 PHACTR4Q8IZ21 702 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 KRT78Q8N1N4 520 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 DEFB119Q8N690 84 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 EFCAB3Q8N7B9 438 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 OR2L8Q8NGY9 312 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 CLDN23Q96B33 292 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 KIR3DX1Q9H7L2 352 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 DCLRE1BQ9H816 532 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 RNPEPL1Q9HAU8 725 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 NMRK1Q9NWW6 199 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ADA2Q9NZK5 511 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 RUVBL1Q9Y265 456 aaKnown RBP17.48■□□□□ 0.39
VIM-201ENST00000224237 DLGAP4Q9Y2H0 992 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 PCM1Q15154 2024 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ASPDHA6ND91 283 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 NDUFS2O75306 463 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 THEGLP0DJG4 465 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ME2P23368 584 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 CXCR2P25025 360 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ACSM2AQ08AH3 577 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ILF3Q12906 894 aaKnown RBP eCLIP17.48■□□□□ 0.39
VIM-201ENST00000224237 TLR1Q15399 786 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ACSM2BQ68CK6 577 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 ADNP2Q6IQ32 1131 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 NOXRED1Q6NXP6 359 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 MINDY1Q8N5J2 469 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 CAMKK1Q8N5S9 505 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 CCL4L1Q8NHW4 92 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 LRRC58Q96CX6 371 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 GPATCH1Q9BRR8 931 aaKnown RBP17.48■□□□□ 0.39
VIM-201ENST00000224237 PCED1AQ9H1Q7 454 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 CLMPQ9H6B4 373 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 SPTY2D1-AS1A0A0U1RR47 76 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 NPPAP01160 153 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 SDC1P18827 310 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 PIK3CBP42338 1070 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 RPS9P46781 194 aaKnown RBP17.47■□□□□ 0.39
VIM-201ENST00000224237 CLNS1AP54105 237 aaKnown RBP17.47■□□□□ 0.39
VIM-201ENST00000224237 CLDN8P56748 225 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 RPS13P62277 151 aaKnown RBP17.47■□□□□ 0.39
VIM-201ENST00000224237 MEF2AQ02078 507 aaPredicted RBP17.47■□□□□ 0.39
VIM-201ENST00000224237 CEACAM7Q14002 265 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 SPIN4Q56A73 249 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 TMIGD1Q6UXZ0 262 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 ABHD11Q8NFV4 315 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 JADE3Q92613 823 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 ORAI3Q9BRQ5 295 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 SPNS1Q9H2V7 528 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 DMRT3Q9NQL9 472 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 TMEM181Q9P2C4 612 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 PACSIN3Q9UKS6 424 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 ICKQ9UPZ9 632 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 PCDHB11Q9Y5F2 797 aa17.47■□□□□ 0.39
VIM-201ENST00000224237 FXYD1O00168 92 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 TRIM38O00635 465 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 MYO1DO94832 1006 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 ETHE1O95571 254 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 IL6P05231 212 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 F3P13726 295 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 PSMB5P28074 263 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 CCR8P51685 355 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 NFYCQ13952 458 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 PAGE3Q5JUK9 113 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 DPP10Q8N608 796 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 ENDOVQ8N8Q3 282 aaKnown RBP17.46■□□□□ 0.39
VIM-201ENST00000224237 C11orf24Q96F05 449 aaPredicted RBP17.46■□□□□ 0.39
VIM-201ENST00000224237 AIF1LQ9BQI0 150 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 SLC39A3Q9BRY0 314 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 PITHD1Q9GZP4 211 aaPredicted RBP17.46■□□□□ 0.39
VIM-201ENST00000224237 XKR8Q9H6D3 395 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 IL1RL2Q9HB29 575 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 PPT2Q9UMR5 302 aa17.46■□□□□ 0.39
VIM-201ENST00000224237 A6NCN8 305 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 PSMG1O95456 288 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 EML2O95834 649 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 SLC7A2P52569 658 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 FAM174BQ3ZCQ3 159 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 SAMD4BQ5PRF9 694 aaKnown RBP17.46■□□□□ 0.38
VIM-201ENST00000224237 KRTCAP2Q8N6L1 136 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 CADM4Q8NFZ8 388 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 CLHC1Q8NHS4 586 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 SLC13A3Q8WWT9 602 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 TSSK3Q96PN8 268 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 AASDHPPTQ9NRN7 309 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 ABCD2Q9UBJ2 740 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 ADGRE2Q9UHX3 823 aa17.46■□□□□ 0.38
VIM-201ENST00000224237 USP34Q70CQ2 3546 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 MUC3AQ02505 3323 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 PGRP06401 933 aa17.45■□□□□ 0.38
VIM-201ENST00000224237 PRDX1Q06830 199 aaKnown RBP17.45■□□□□ 0.38
VIM-201ENST00000224237 CCDC6Q16204 474 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms