RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 HLA-EP13747 358 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 DGKGP49619 791 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 CASP7P55210 303 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 ALG10BQ5I7T1 473 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 VARS2Q5ST30 1063 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 PAOXQ6QHF9 649 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 PLET1Q6UQ28 207 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 TMEM41AQ96HV5 264 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 BACE2Q9Y5Z0 518 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 TRAFD1O14545 582 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 CLDN11O75508 207 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 GADD45GO95257 159 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 NRIP1P48552 1158 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 APLP1P51693 650 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 LAPTM5Q13571 262 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 FAM69BQ5VUD6 431 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 CEP76Q8TAP6 659 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 ARHGEF4Q9NR80 690 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 R3HDM2Q9Y2K5 976 aaKnown RBP16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 HK1P19367 917 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF41P51814 821 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 ATPAF1Q5TC12 328 aaPredicted RBP16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC39A4Q6P5W5 647 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 HACD2Q6Y1H2 254 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 ANKHQ9HCJ1 492 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 B3GAT2Q9NPZ5 323 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 FKBPLQ9UIM3 349 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 PADI2Q9Y2J8 665 aa16.6■□□□□ 0.25
CACNA1A-253ENST00000637927 KLK3P07288 261 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 BMP1P13497 986 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 PTPN2P17706 415 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 MFSD13AQ14CX5 517 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 ZACNQ401N2 412 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 GPR157Q5UAW9 335 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 DLG3Q92796 817 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 KLRG1Q96E93 195 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 IL4I1Q96RQ9 567 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 WASF3Q9UPY6 502 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 NCANO14594 1321 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 OR51F1A6NGY5 319 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 OR4F21O95013 312 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 SERPINA6P08185 405 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 CYTH4Q9UIA0 394 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 C8AP07357 584 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 TGM1P22735 817 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 CHRNA4P43681 627 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 HERV-K104P61576 105 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 DPYSQ14117 519 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 MFSD2AQ8NA29 543 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 AKAP1Q92667 903 aaKnown RBP eCLIP16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 NUS1Q96E22 293 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 ARL5BQ96KC2 179 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 PPP1R11O60927 126 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 COL6A2P12110 1019 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 SLC16A9Q7RTY1 509 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 SNX27Q96L92 541 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 GBA3Q9H227 469 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 IL20RAQ9UHF4 553 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 BCL9O00512 1426 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 TRAV6A0A075B6T7 132 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 RAB27BO00194 218 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 SYNGR4O95473 234 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 PRR5P85299 388 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 PARP15Q460N3 678 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 GPALPP1Q8IXQ4 340 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 KCNK6Q9Y257 313 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 MYBPHLA2RUH7 354 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF705EA8MWA4 302 aaPredicted RBP16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 HCAR3P49019 387 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 SELENOVP59797 346 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 GRM3Q14832 879 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 EGFLAMQ63HQ2 1017 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 ARL9Q6T311 187 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 ABHD15Q6UXT9 468 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 OTUB2Q96DC9 234 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 LRRC4CQ9HCJ2 640 aa16.59■□□□□ 0.25
CACNA1A-253ENST00000637927 KAT6AQ92794 2004 aa16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 FABP12A6NFH5 140 aa16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 GPR25O00155 361 aa16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 SOX14O95416 240 aa16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 PKMP14618 531 aaKnown RBP16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 ZNF761Q86XN6 746 aaPredicted RBP16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 CPNE9Q8IYJ1 553 aa16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 HHIPQ96QV1 700 aa16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 FER1L4A9Z1Z3 1794 aa16.58■□□□□ 0.25
CACNA1A-253ENST00000637927 INSIG1O15503 277 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 ZIC2O95409 532 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 ABHD13Q7L211 337 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 DGCR14Q96DF8 476 aaKnown RBP16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 CPNE2Q96FN4 548 aaPredicted RBP16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 PPM1HQ9ULR3 514 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 CYP3A7-CYP3A51PA0A087WV96 503 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 HDAC3O15379 428 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 KLRC4O43908 158 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 UGT1A9O60656 530 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 FGF19O95750 216 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 SPARCP09486 303 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 UGT1A6P19224 532 aa16.58■□□□□ 0.24
CACNA1A-253ENST00000637927 UGT1A1P22309 533 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms