RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CSKP41240 450 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RACK1P63244 317 aaKnown RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 CHRNB3Q05901 458 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RUNX1T1Q06455 604 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RBBP7Q16576 425 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 FXNQ16595 210 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 COQ5Q5HYK3 327 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 BRMS1LQ5PSV4 323 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 PXDC1Q5TGL8 231 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 PTRHD1Q6GMV3 140 aaKnown RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 TIGD7Q6NT04 549 aaPredicted RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 ERAP2Q6P179 960 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 FAM171BQ6P995 826 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 DOK6Q6PKX4 331 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 CHRDL2Q6WN34 429 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 GLT6D1Q7Z4J2 308 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RAB44Q7Z6P3 723 aaPredicted RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 ANKRD13BQ86YJ7 626 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 HID1Q8IV36 788 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 SCML4Q8N228 414 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 OR10A6Q8NH74 314 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 FAM162AQ96A26 154 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 FUBP1Q96AE4 644 aaKnown RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 MSANTD3Q96H12 275 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 ZNF599Q96NL3 588 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 VPS35Q96QK1 796 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 NODALQ96S42 347 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 ACAT2Q9BWD1 397 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 LIMD1Q9UGP4 676 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 AGO1Q9UL18 857 aaKnown RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 OR6C70A6NIJ9 312 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 SCO1O75880 301 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 B3GALT4O96024 378 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 C1QCP02747 245 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 ALOX5P09917 674 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RAP2AP10114 183 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 MSH3P20585 1137 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 POU1F1P28069 291 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 GNG2P59768 71 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RAPSNQ13702 412 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 TRIP4Q15650 581 aaPredicted RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 AASDHQ4L235 1098 aaPredicted RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 ARMCX4Q5H9R4 360 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RBM48Q5RL73 367 aaKnown RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 LY6G5CQ5SRR4 150 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 DDI2Q5TDH0 399 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 HIPK1Q86Z02 1210 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 PHACTR4Q8IZ21 702 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 RTL3Q8N8U3 475 aaKnown RBP8.87□□□□□ -0.99
TOP1-201ENST00000361337 TOX2Q96NM4 488 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 BRINP2Q9C0B6 783 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 SLC6A13Q9NSD5 602 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 C14orf119Q9NWQ9 140 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 VNN3Q9NY84 501 aa8.87□□□□□ -0.99
TOP1-201ENST00000361337 SMIM30A4D0T7 59 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 A8MUA0 341 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 BTN3A1O00481 513 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 EFCAB14O75071 495 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 RHOBTB1O94844 696 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 MLYCDO95822 493 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 GLP2RO95838 553 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 FTH1P02794 183 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 PTPN2P17706 415 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 GGT1P19440 569 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 HTR2BP41595 481 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 PIK3CGP48736 1102 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 OR2B6P58173 313 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ZNF33AQ06730 810 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 BCL2L1Q07817 233 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 AFMIDQ63HM1 303 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 LETMD1Q6P1Q0 360 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 HDDC2Q7Z4H3 204 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ZFAND4Q86XD8 727 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 CCDC28AQ8IWP9 274 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ARRDC2Q8TBH0 407 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 UBE2FQ969M7 185 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 CGREF1Q99674 301 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 WDR12Q9GZL7 423 aaKnown RBP8.86□□□□□ -0.99
TOP1-201ENST00000361337 SP140LQ9H930 580 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 C8orf4Q9NR00 106 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ATP6V1HQ9UI12 483 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 PCTPQ9UKL6 214 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 SCML2Q9UQR0 700 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 PKP3Q9Y446 797 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 HCFC2Q9Y5Z7 792 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 LOC100130705A0A1B0GUX0 176 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 OR1I1O60431 355 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 GUCA1CO95843 209 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ANXA6P08133 673 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 RPS17P08708 135 aaKnown RBP8.86□□□□□ -0.99
TOP1-201ENST00000361337 ALPIP09923 528 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 EPHA2P29317 976 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 HOXC13P31276 330 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 MASP1P48740 699 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ERVPABLB-1P60509 514 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 PTGR1Q14914 329 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 RFTN2Q52LD8 501 aaPredicted RBP8.86□□□□□ -0.99
TOP1-201ENST00000361337 FAM98BQ52LJ0 330 aaKnown RBP8.86□□□□□ -0.99
TOP1-201ENST00000361337 AKIRIN2Q53H80 203 aa8.86□□□□□ -0.99
TOP1-201ENST00000361337 ANKS6Q68DC2 871 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms