RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 EEDO75530 441 aaKnown RBP17.51■□□□□ 0.39
VIM-201ENST00000224237 PRPS2P11908 318 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 IL12AP29459 219 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 RAB28P51157 221 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 ACTR3P61158 418 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 DDX39BQ13838 428 aaKnown RBP17.51■□□□□ 0.39
VIM-201ENST00000224237 PTGR1Q14914 329 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 RPE65Q16518 533 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 USP39Q53GS9 565 aaKnown RBP17.51■□□□□ 0.39
VIM-201ENST00000224237 PIGGQ5H8A4 983 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 ABRAXAS1Q6UWZ7 409 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 RIPOR1Q6ZS17 1223 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 HPS6Q86YV9 775 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 LAS2Q8IYD9 372 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 UBALD2Q8IYN6 164 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 GLB1L3Q8NCI6 653 aaPredicted RBP17.51■□□□□ 0.39
VIM-201ENST00000224237 OR13H1Q8NG92 308 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 CAMK1GQ96NX5 476 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 ZBTB18Q99592 522 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 SPAG4Q9NPE6 437 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 GEMIN8Q9NWZ8 242 aaKnown RBP17.51■□□□□ 0.39
VIM-201ENST00000224237 TRNAU1APQ9NX07 287 aaKnown RBP17.51■□□□□ 0.39
VIM-201ENST00000224237 THEGQ9P2T0 379 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 TAC3Q9UHF0 121 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 MUTYHQ9UIF7 546 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 CROTQ9UKG9 612 aa17.51■□□□□ 0.39
VIM-201ENST00000224237 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.51■□□□□ 0.39
VIM-201ENST00000224237 A0A1W2PPC4 97 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 PIPSLA2A3N6 862 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 OR52A4PA6NMU1 304 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 LMNAP02545 664 aaKnown RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 MTHFD1P11586 935 aaKnown RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 PCNAP12004 261 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 AMD1P17707 334 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 DPP6P42658 865 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 ALG11Q2TAA5 492 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 C8orf82Q6P1X6 216 aaPredicted RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 C17orf64Q86WR6 236 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 GJD3Q8N144 294 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 C2orf73Q8N5S3 287 aaPredicted RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 HUS1BQ8NHY5 278 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 UBE2E3Q969T4 207 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 SH3KBP1Q96B97 665 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 CCDC124Q96CT7 223 aaKnown RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 APIPQ96GX9 242 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 SLC45A3Q96JT2 553 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 NRTNQ99748 197 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 CHRDQ9H2X0 955 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 GID8Q9NWU2 228 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 LEF1Q9UJU2 399 aaPredicted RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 PCOLCE2Q9UKZ9 415 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 PNMA8BQ9ULN7 279 aaPredicted RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 DGKBQ9Y6T7 804 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 COLEC10Q9Y6Z7 277 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 LRP4O75096 1905 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 RASGRP1O95267 797 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 BCKDHAP12694 445 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 CDH1P12830 882 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 AK4P27144 223 aaPredicted RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 TIGD2Q4W5G0 525 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 SLC22A18ASQ8N1D0 253 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 RNF175Q8N4F7 328 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 SPEM1Q8N4L4 309 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 PJA1Q8NG27 643 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 FAM174AQ8TBP5 190 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 STMN2Q93045 179 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 VPS33AQ96AX1 596 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 HOPXQ9BPY8 73 aaPredicted RBP17.5■□□□□ 0.39
VIM-201ENST00000224237 DPY30Q9C005 99 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 TMEM168Q9H0V1 697 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 MAP10Q9P2G4 905 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 TBC1D29Q9UFV1 150 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 POMPQ9Y244 141 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 INVSQ9Y283 1065 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 SLCO1B1Q9Y6L6 691 aa17.5■□□□□ 0.39
VIM-201ENST00000224237 MAGEB17A8MXT2 336 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 DCNP07585 359 aaKnown RBP17.49■□□□□ 0.39
VIM-201ENST00000224237 NDUFS1P28331 727 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 PKLRP30613 574 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 ACTR1BP42025 376 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 ACTR1AP61163 376 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 PRMT9Q6P2P2 845 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 LAYNQ6UX15 382 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 HID1Q8IV36 788 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 LINC01555Q8NAE3 123 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 OR52E1Q8NGJ3 308 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 SNX19Q92543 992 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 FCRL1Q96LA6 429 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 APOLD1Q96LR9 279 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 ACAT2Q9BWD1 397 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 PELI2Q9HAT8 420 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 PRM3Q9NNZ6 103 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 CD320Q9NPF0 282 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 GPR27Q9NS67 375 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 SCHIP1Q9P0W5 487 aaPredicted RBP17.49■□□□□ 0.39
VIM-201ENST00000224237 TSC22D4Q9Y3Q8 395 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 GON4LQ3T8J9 2241 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 DNAH14Q0VDD8 3507 aa17.49■□□□□ 0.39
VIM-201ENST00000224237 A0A1W2PPV9 198 aa17.48■□□□□ 0.39
VIM-201ENST00000224237 FOXE1O00358 373 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms