RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 NLE1Q9NVX2 485 aaPredicted RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 CD84Q9UIB8 345 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 SLC22A14Q9Y267 594 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 PCDHB14Q9Y5E9 798 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 OR2AG2A6NM03 316 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 M0QX08 132 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 HAS3O00219 553 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 DYRK3O43781 588 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TPST2O60704 377 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 PRAMEF11O60813 436 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 EPOP01588 193 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 RFX3P48380 749 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TUFMP49411 452 aaKnown RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 CDH4P55283 916 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 SRSF11Q05519 484 aaKnown RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 SYCE2Q6PIF2 218 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 USP30Q70CQ3 517 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 KRT74Q7RTS7 529 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 ZBED3Q96IU2 234 aaPredicted RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 TTYH2Q9BSA4 534 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TUBB1Q9H4B7 451 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TPT1P8Q9HAU6 139 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 FARSBQ9NSD9 589 aaKnown RBP10.26□□□□□ -0.77
USB1-212ENST00000566082 B3GNT3Q9Y2A9 372 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 SPO11Q9Y5K1 396 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 A0A1B0GVM2 712 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 BTN3A3O00478 584 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 GPR39O43194 453 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 F2P00734 622 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 IFNW1P05000 195 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 PRKAR1AP10644 381 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 ANXA8P13928 327 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 PRPS1L1P21108 318 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 CD40LGP29965 261 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 KDELR2P33947 212 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 PIGAP37287 484 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 SPAM1P38567 509 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 C2orf80Q0P641 193 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 NPRL3Q12980 569 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 HKDC1Q2TB90 917 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TBRG1Q3YBR2 411 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 IQCCQ4KMZ1 466 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 DESI1Q6ICB0 168 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 CACTIN-AS1Q8N1I8 211 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 OR8H1Q8NGG4 311 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 GANCQ8TET4 914 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 TMEM169Q96HH4 297 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 CTPS2Q9NRF8 586 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 MKLN1Q9UL63 735 aa10.26□□□□□ -0.77
USB1-212ENST00000566082 CDK5RAP2Q96SN8 1893 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 CCNB2O95067 398 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 DNTTP04053 509 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 BMP4P12644 408 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 PAICSP22234 425 aaKnown RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 OR1D2P34982 312 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 ELAVL2Q12926 359 aaKnown RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 GCNT6Q5T4J0 391 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 DDI2Q5TDH0 399 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 TMEM207Q6UWW9 146 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 LRRTM3Q86VH5 581 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 TRAPPC5Q8IUR0 188 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 CYP4Z2PQ8N1L4 340 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 ELMOD1Q8N336 334 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 TCAIMQ8N3R3 496 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 FAM86B1Q8N7N1 296 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 ASCC1Q8N9N2 400 aaKnown RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 COL21A1Q96P44 957 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 C11orf84Q9BUA3 381 aaPredicted RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 SLC9A8Q9Y2E8 581 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 KIF13BQ9NQT8 1826 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 ISPDA4D126 451 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 FXYD1O00168 92 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 MTX2O75431 263 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 CAPN15O75808 1086 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 SEC14L2O76054 403 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 FAM163BP0C2L3 166 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 PSKH1P11801 424 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 ZNF45Q02386 682 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 RNASE12Q5GAN4 147 aaKnown RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 KIAA0319Q5VV43 1072 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 PIANPQ8IYJ0 282 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 CADM3Q8N126 398 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 C3orf58Q8NDZ4 430 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 OR5AK3PQ8NH89 298 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 NT5C3BQ969T7 300 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 PAWRQ96IZ0 340 aaKnown RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 ART5Q96L15 291 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 BARD1Q99728 777 aaKnown RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 TP63Q9H3D4 680 aaPredicted RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 CAPN10Q9HC96 672 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 PAQR5Q9NXK6 330 aaPredicted RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 PTGFRNQ9P2B2 879 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 RHCGQ9UBD6 479 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 ABCD2Q9UBJ2 740 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 SLC25A13Q9UJS0 675 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 TARM1B6A8C7 271 aa10.25□□□□□ -0.77
USB1-212ENST00000566082 SAP18O00422 153 aaKnown RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 ONECUT3O60422 494 aaPredicted RBP10.25□□□□□ -0.77
USB1-212ENST00000566082 RPS17P08708 135 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms