RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 HIST1H2AGP0C0S8 130 aaPredicted RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 HIST1H2ADP20671 130 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 ALAS2P22557 587 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 CARSP49589 748 aaKnown RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 AP1S2P56377 157 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 AP2B1P63010 937 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 TLE1Q04724 770 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 DHX9Q08211 1270 aaKnown RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 VWA5B1Q5TIE3 1220 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 IRAK1BP1Q5VVH5 260 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 ICE2Q659A1 982 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 FCRL6Q6DN72 434 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 FAM45BPQ6NSW5 357 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 TTLL10Q6ZVT0 673 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 OVCH1Q7RTY7 1134 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 MRGPREQ86SM8 312 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 ATCAYQ86WG3 371 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 CREG2Q8IUH2 290 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 FAM45AQ8TCE6 357 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 HIST1H2AHQ96KK5 128 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 CCDC138Q96M89 665 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 GPR21Q99679 349 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 HIST1H2AJQ99878 128 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 PLCD4Q9BRC7 762 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 H2AFJQ9BTM1 129 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 TRIM54Q9BYV2 358 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 MLXIPLQ9NP71 852 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 CCDC177Q9NQR7 707 aaPredicted RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 SEMA3GQ9NS98 782 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 IARS2Q9NSE4 1012 aaKnown RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 DHCR7Q9UBM7 475 aaKnown RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 ZC3H7BQ9UGR2 993 aaKnown RBP16.03■□□□□ 0.16
USB1-211ENST00000565662 NUP210LQ5VU65 1888 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 BOD1L1Q8NFC6 3051 aa16.03■□□□□ 0.16
USB1-211ENST00000565662 BSNQ9UPA5 3926 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 A0A1W2PPV9 198 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 SEC31AO94979 1220 aaKnown RBP16.02■□□□□ 0.16
USB1-211ENST00000565662 SLC16A8O95907 504 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 CYC1P08574 325 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 ENO2P09104 434 aaPredicted RBP16.02■□□□□ 0.16
USB1-211ENST00000565662 OCA2Q04671 838 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 PDAP1Q13442 181 aaKnown RBP16.02■□□□□ 0.16
USB1-211ENST00000565662 NDUFA9Q16795 377 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 BBS9Q3SYG4 887 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 THEMIS2Q5TEJ8 643 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 UBE2R2Q712K3 238 aaPredicted RBP16.02■□□□□ 0.16
USB1-211ENST00000565662 PTRH1Q86Y79 214 aaKnown RBP16.02■□□□□ 0.16
USB1-211ENST00000565662 ATL1Q8WXF7 558 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 THAP11Q96EK4 314 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 CAPZA3Q96KX2 299 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 RUFY1Q96T51 708 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 NRTNQ99748 197 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 DPH7Q9BTV6 452 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 PPANQ9NQ55 473 aaKnown RBP16.02■□□□□ 0.16
USB1-211ENST00000565662 C14orf105Q9NVL8 296 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 ZFATQ9P243 1243 aa16.02■□□□□ 0.16
USB1-211ENST00000565662 FER1L5A0AVI2 2057 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 HYKKA2RU49 373 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 E7ENX8 843 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 AGPSO00116 658 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 HAUS5O94927 633 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 SYF2O95926 243 aaKnown RBP16.01■□□□□ 0.15
USB1-211ENST00000565662 MMP11P24347 488 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 OTX2P32243 289 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 GRK3P35626 688 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 SOX8P57073 446 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 VSX2P58304 361 aaPredicted RBP16.01■□□□□ 0.15
USB1-211ENST00000565662 IL2P60568 153 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 SKP1P63208 163 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 TAP2Q03519 686 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 CALCOCO2Q13137 446 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 AIMP2Q13155 320 aaKnown RBP16.01■□□□□ 0.15
USB1-211ENST00000565662 CBLBQ13191 982 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 WASHC2DQ5SRD0 308 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 C1orf189Q5VU69 101 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 STEAP4Q687X5 459 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 NIPAL1Q6NVV3 410 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 HIBCHQ6NVY1 386 aaPredicted RBP16.01■□□□□ 0.15
USB1-211ENST00000565662 SLC26A11Q86WA9 606 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 C2orf73Q8N5S3 287 aaPredicted RBP16.01■□□□□ 0.15
USB1-211ENST00000565662 TBC1D19Q8N5T2 526 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 ZNF480Q8WV37 535 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 ANKRD7Q92527 254 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 FAM136AQ96C01 138 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 PKP4Q99569 1192 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 PHACTR1Q9C0D0 580 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 EPN3Q9H201 632 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 PARVBQ9HBI1 364 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 ZNF304Q9HCX3 659 aa16.01■□□□□ 0.15
USB1-211ENST00000565662 ZNF282Q9UDV7 671 aaPredicted RBP16.01■□□□□ 0.15
USB1-211ENST00000565662 RUVBL2Q9Y230 463 aaKnown RBP16.01■□□□□ 0.15
USB1-211ENST00000565662 FAM187AA6NFU0 413 aa16■□□□□ 0.15
USB1-211ENST00000565662 EFCAB8A8MWE9 144 aa16■□□□□ 0.15
USB1-211ENST00000565662 EIF3HO15372 352 aaKnown RBP eCLIP16■□□□□ 0.15
USB1-211ENST00000565662 IVDP26440 423 aa16■□□□□ 0.15
USB1-211ENST00000565662 PSMB5P28074 263 aa16■□□□□ 0.15
USB1-211ENST00000565662 CCL11P51671 97 aa16■□□□□ 0.15
USB1-211ENST00000565662 RPS15AP62244 130 aaKnown RBP16■□□□□ 0.15
USB1-211ENST00000565662 MPP1Q00013 466 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms