RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 RPL21P46778 160 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MMP16P51512 607 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PNLIPRP1P54315 467 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ARSFP54793 590 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 RPS18P62269 152 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DCDP81605 110 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TIAL1Q01085 375 aaKnown RBP eCLIP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 NFATC3Q12968 1075 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CUL1Q13616 776 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FASTKQ14296 549 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FRG1Q14331 258 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 HIF1AQ16665 826 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DEFB110Q30KQ9 67 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PTCHD3Q3KNS1 767 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TCTE1Q5JU00 501 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TEDDM1Q5T9Z0 273 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 YOD1Q5VVQ6 348 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MLIPQ5VWP3 458 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 STEAP4Q687X5 459 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 RHBDD2Q6NTF9 364 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 FBXO42Q6P3S6 717 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GALNT7Q86SF2 657 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ENDOVQ8N8Q3 282 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MNS1Q8NEH6 495 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SPATA4Q8NEY3 305 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 OR2L3Q8NG85 312 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 OR2A1Q8NGT9 310 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GIMAP7Q8NHV1 300 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PROKR1Q8TCW9 393 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CD200R1Q8TD46 325 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 EEF1AKMT1Q8WVE0 214 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DLG3Q92796 817 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CERS2Q96G23 380 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 MIPEPQ99797 713 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 ERP44Q9BS26 406 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 DHRS4Q9BTZ2 278 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TXLNGQ9NUQ3 528 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 GPN3Q9UHW5 284 aaPredicted RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TRMT6Q9UJA5 497 aaKnown RBP9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 TCFL5Q9UL49 500 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 SRPK3Q9UPE1 567 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 CHMP2BQ9UQN3 213 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 VWA7Q9Y334 891 aa9.34□□□□□ -0.91
TNFRSF1A-214ENST00000543048 PRRC2CQ9Y520 2896 aaKnown RBP9.34□□□□□ -0.92
TNFRSF1A-214ENST00000543048 KRT87PA6NCN2 255 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TP73O15350 636 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SYF2O95926 243 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PIM1P11309 404 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ALAS2P22557 587 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MCM3P25205 808 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PSMB5P28074 263 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 RGS4P49798 205 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MRPS25P82663 173 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PRDX1Q06830 199 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PDIA2Q13087 525 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 TSTA3Q13630 321 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 GRM7Q14831 915 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NAA25Q14CX7 972 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NCF4Q15080 339 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FAM214AQ32MH5 1076 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 WASHC2DQ5SRD0 308 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 C1orf189Q5VU69 101 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 LRRC8EQ6NSJ5 796 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PAQR3Q6TCH7 311 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SUSD1Q6UWL2 747 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 UBE2R2Q712K3 238 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ZNF572Q7Z3I7 529 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ANKMY2Q8IV38 441 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 APLFQ8IW19 511 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PALM2Q8IXS6 379 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CPNE9Q8IYJ1 553 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CEP112Q8N8E3 955 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MCOLN3Q8TDD5 553 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ABHD17AQ96GS6 310 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ZNF285Q96NJ3 590 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 GBP5Q96PP8 586 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NDNQ99608 321 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SELENOSQ9BQE4 189 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 DPH7Q9BTV6 452 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ACAT2Q9BWD1 397 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 PLAC1Q9HBJ0 212 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MRPS30Q9NP92 439 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 ENAMQ9NRM1 1142 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 UTP6Q9NYH9 597 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 WHRNQ9P202 907 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 DHCR7Q9UBM7 475 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CORO1CQ9ULV4 474 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SNX7Q9UNH6 387 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MAN2B2Q9Y2E5 1009 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 HEMK1Q9Y5R4 338 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 NUP210LQ5VU65 1888 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 CNTRLQ7Z7A1 2325 aa9.33□□□□□ -0.92
TNFRSF1A-214ENST00000543048 FITM1A5D6W6 292 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 E7ENX8 843 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 E7ESA3 106 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 MKRN2OSH3BPM6 223 aa9.32□□□□□ -0.92
TNFRSF1A-214ENST00000543048 SLC16A5O15375 505 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms