RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SH3BP2P78314 561 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 IRF9Q00978 393 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 TUBB3Q13509 450 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 OR4D1Q15615 310 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 PRAMEF13Q5VWM6 474 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 KIAA1614Q5VZ46 1190 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 ICE2Q659A1 982 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 CAPN13Q6MZZ7 669 aaPredicted RBP18.7■□□□□ 0.58
DDX55-207ENST00000540763 LCTLQ6UWM7 567 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 KLHDC8AQ8IYD2 350 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 SPATA6LQ8N4H0 392 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 PDPRQ8NCN5 879 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 MZB1Q8WU39 189 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 RHBDF1Q96CC6 855 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 OR6C1Q96RD1 312 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 ATOH8Q96SQ7 321 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 MIPEPQ99797 713 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 HAUS8Q9BT25 410 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 ROPN1BQ9BZX4 212 aaPredicted RBP18.7■□□□□ 0.58
DDX55-207ENST00000540763 VPS11Q9H270 941 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 ROPN1Q9HAT0 212 aaPredicted RBP18.7■□□□□ 0.58
DDX55-207ENST00000540763 MRPS30Q9NP92 439 aaKnown RBP18.7■□□□□ 0.58
DDX55-207ENST00000540763 FGF21Q9NSA1 209 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 UTP6Q9NYH9 597 aaKnown RBP18.7■□□□□ 0.58
DDX55-207ENST00000540763 NUDT4Q9NZJ9 180 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 TAC3Q9UHF0 121 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 RNF112Q9ULX5 631 aa18.7■□□□□ 0.58
DDX55-207ENST00000540763 MDC1Q14676 2089 aaKnown RBP18.69■□□□□ 0.58
DDX55-207ENST00000540763 SYCE1LA8MT33 242 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 C9orf172C9J069 976 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 POLR1CO15160 346 aaPredicted RBP18.69■□□□□ 0.58
DDX55-207ENST00000540763 IPO13O94829 963 aaKnown RBP18.69■□□□□ 0.58
DDX55-207ENST00000540763 GUCA1CO95843 209 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 EBLN1P0CF75 366 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 RELAQ04206 551 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 FOXM1Q08050 763 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 CYP4F3Q08477 520 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 NAE1Q13564 534 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 ZIC1Q15915 447 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.69■□□□□ 0.58
DDX55-207ENST00000540763 SULT1C3Q6IMI6 304 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 FIGLAQ6QHK4 219 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 PPP1R3BQ86XI6 285 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 SNIP1Q8TAD8 396 aaKnown RBP18.69■□□□□ 0.58
DDX55-207ENST00000540763 USP7Q93009 1102 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 TSNARE1Q96NA8 513 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 GPR78Q96P69 363 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 EGFL8Q99944 293 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 TMEM109Q9BVC6 243 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 UNKQ9C0B0 810 aaKnown RBP18.69■□□□□ 0.58
DDX55-207ENST00000540763 ALG9Q9H6U8 611 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 RARRES3Q9UL19 164 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 WDFY3Q8IZQ1 3526 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 SDK2Q58EX2 2172 aa18.69■□□□□ 0.58
DDX55-207ENST00000540763 DMXL2Q8TDJ6 3036 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 OR2A25A4D2G3 310 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.68■□□□□ 0.58
DDX55-207ENST00000540763 PRAMEF10O60809 474 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 RBP1P09455 135 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 SLC5A2P31639 672 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 GGT5P36269 586 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 GABRA4P48169 554 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 TSTA3Q13630 321 aaPredicted RBP18.68■□□□□ 0.58
DDX55-207ENST00000540763 KCNAB1Q14722 419 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 ZXDCQ2QGD7 858 aaPredicted RBP18.68■□□□□ 0.58
DDX55-207ENST00000540763 TECRLQ5HYJ1 363 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 ZC3H12BQ5HYM0 836 aaKnown RBP18.68■□□□□ 0.58
DDX55-207ENST00000540763 THEMIS2Q5TEJ8 643 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 CDHR3Q6ZTQ4 885 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 EPS8L3Q8TE67 593 aaKnown RBP18.68■□□□□ 0.58
DDX55-207ENST00000540763 FGF11Q92914 225 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 ZNF501Q96CX3 271 aaPredicted RBP18.68■□□□□ 0.58
DDX55-207ENST00000540763 MED8Q96G25 268 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 ATG10Q9H0Y0 220 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 CNOT10Q9H9A5 744 aaKnown RBP18.68■□□□□ 0.58
DDX55-207ENST00000540763 SLC6A20Q9NP91 592 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 ENAMQ9NRM1 1142 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 LHX6Q9UPM6 363 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 B3GALT1Q9Y5Z6 326 aa18.68■□□□□ 0.58
DDX55-207ENST00000540763 ACACAQ13085 2346 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 AGRPO00253 132 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 S100BP04271 92 aaPredicted RBP18.67■□□□□ 0.58
DDX55-207ENST00000540763 GMPRP36959 345 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 SLC6A12P48065 614 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 PCBP4P57723 403 aaKnown RBP18.67■□□□□ 0.58
DDX55-207ENST00000540763 IFFO1Q0D2I5 559 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 PTCHD3Q3KNS1 767 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 FCRL6Q6DN72 434 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 ZNF425Q6IV72 752 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 RNF44Q7L0R7 432 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 C17orf64Q86WR6 236 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 DNAJC22Q8N4W6 341 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 MDM1Q8TC05 714 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 PLCD4Q9BRC7 762 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 DPH7Q9BTV6 452 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 ACAT2Q9BWD1 397 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 KLHL25Q9H0H3 589 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 APMAPQ9HDC9 416 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 FAM60AQ9NP50 221 aa18.67■□□□□ 0.58
DDX55-207ENST00000540763 CD274Q9NZQ7 290 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms