RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 B3GAT3O94766 335 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 EBLN1P0CF75 366 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 PRPS2P11908 318 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 C21orf33P30042 268 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 TIE1P35590 1138 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 BRCC3P46736 316 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 HSPA7P48741 367 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 PSEN2P49810 448 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 VLDLRP98155 873 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 GPR50Q13585 617 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 EIF3MQ7L2H7 374 aaKnown RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 TESCQ96BS2 214 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 RPRD1AQ96P16 312 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 SLC29A3Q9BZD2 475 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 P2RY12Q9H244 342 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 TRMT13Q9NUP7 481 aaKnown RBP17.12■□□□□ 0.33
RAB40C-205ENST00000539661 FKBPLQ9UIM3 349 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 BTBD3Q9Y2F9 522 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 OARD1Q9Y530 152 aa17.12■□□□□ 0.33
RAB40C-205ENST00000539661 H7C0S8 307 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 HAS3O00219 553 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 MANBAO00462 879 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 UGT2B17O75795 530 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 GRK5P34947 590 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 GGT2P36268 569 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 E2F2Q14209 437 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 EIF4HQ15056 248 aaKnown RBP17.11■□□□□ 0.33
RAB40C-205ENST00000539661 ZRANB3Q5FWF4 1079 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 ZSWIM9Q86XI8 627 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 GALNT6Q8NCL4 622 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 MS4A4AQ96JQ5 239 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 DEPDC7Q96QD5 511 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 SDHCQ99643 169 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-205ENST00000539661 INPP5KQ9BT40 448 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 NSUN3Q9H649 340 aaKnown RBP17.11■□□□□ 0.33
RAB40C-205ENST00000539661 SLA2Q9H6Q3 261 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 CRNNQ9UBG3 495 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-205ENST00000539661 PCDHB1Q9Y5F3 818 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 PLXNA3P51805 1871 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 A0A075B6Q4 140 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 CCL15-CCL14A0A0B4J2E2 113 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 LOC100506127A0A0U1RQW1 187 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 FFAR3O14843 346 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 GPR42O15529 346 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 CHRNB1P11230 501 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 KDELR2P33947 212 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 RGS6P49758 472 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 ABRQ12979 859 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 GPR162Q16538 588 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 CCL15Q16663 113 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 VMACQ2NL98 169 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 DOK6Q6PKX4 331 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 CBLL1Q75N03 491 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 ST13P5Q8NFI4 369 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-205ENST00000539661 UBTD2Q8WUN7 234 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 GGHQ92820 318 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 TRIM63Q969Q1 353 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 PSKH2Q96QS6 385 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 MYOCQ99972 504 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 CD244Q9BZW8 370 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 ITM2CQ9NQX7 267 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 FARSBQ9NSD9 589 aaKnown RBP17.11■□□□□ 0.33
RAB40C-205ENST00000539661 PCDHGB2Q9Y5G2 931 aa17.11■□□□□ 0.33
RAB40C-205ENST00000539661 SLC19A1P41440 591 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 LRRC26Q2I0M4 334 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 TIMM50Q3ZCQ8 353 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 ERAP2Q6P179 960 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 CPA6Q8N4T0 437 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 LPPQ93052 612 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 ST6GAL2Q96JF0 529 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 SLC30A2Q9BRI3 323 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 OR51E2Q9H255 320 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 FBXO44Q9H4M3 255 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 SIRT5Q9NXA8 310 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 ELOVL2Q9NXB9 296 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 TRIP12Q14669 1992 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-205ENST00000539661 TLL1O43897 1013 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 ADORA3P0DMS8 318 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 PPP2R2DQ66LE6 453 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 ZNF551Q7Z340 670 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-205ENST00000539661 CLHC1Q8NHS4 586 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 GRPEL2Q8TAA5 225 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 TINF2Q9BSI4 451 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 FAM126AQ9BYI3 521 aaPredicted RBP17.1■□□□□ 0.33
RAB40C-205ENST00000539661 C3orf14Q9HBI5 128 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 TAS2R9Q9NYW1 312 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 SNX6Q9UNH7 406 aa17.1■□□□□ 0.33
RAB40C-205ENST00000539661 H3BQ06 376 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 RFXANKO14593 260 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 INSIG1O15503 277 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 DIRAS1O95057 198 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 PRKCAP17252 672 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 ITGB6P18564 788 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 PRIM2P49643 509 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 GNG2P59768 71 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 ARMCX4Q5H9R4 360 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 CD300LGQ6UXG3 332 aa17.09■□□□□ 0.33
RAB40C-205ENST00000539661 ZNF517Q6ZMY9 492 aaPredicted RBP17.09■□□□□ 0.33
RAB40C-205ENST00000539661 VN1R5Q7Z5H4 357 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms