RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 MARK3P27448 753 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SERPINA4P29622 427 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TTKP33981 857 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 IDUAP35475 653 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RAD52P43351 418 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RFX5P48382 616 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SOX2P48431 317 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CDK9P50750 372 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CLCN4P51793 760 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 ATP12AP54707 1039 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RPL15P61313 204 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 MYL5Q02045 173 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 C2orf54Q08AI8 447 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 BFSP1Q12934 665 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 PRKG2Q13237 762 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 GAB1Q13480 694 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RAPSNQ13702 412 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 GALNT3Q14435 633 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CAPRIN1Q14444 709 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TAF5Q15542 800 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CRY2Q49AN0 593 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TNFAIP8L3Q5GJ75 292 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 HECTD3Q5T447 861 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 FAM109BQ6ICB4 259 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 PRMT9Q6P2P2 845 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 AAGABQ6PD74 315 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF474Q6S9Z5 364 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 LINC00299Q6ZSB3 139 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 C11orf57Q6ZUT1 292 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRMT10CQ7L0Y3 403 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TFAP2DQ7Z6R9 452 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 GPBP1Q86WP2 473 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CCDC36Q8IYA8 594 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RCOR2Q8IZ40 523 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 FAM185AQ8N0U4 392 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CLEC4FQ8N1N0 589 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 UBE2J2Q8N2K1 259 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC35F6Q8N357 371 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 PAQR4Q8N4S7 273 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 UBL4BQ8N7F7 174 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 LPCAT1Q8NF37 534 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 NCOA7Q8NI08 942 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 VANGL1Q8TAA9 524 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 MCOLN3Q8TDD5 553 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 UTP15Q8TED0 518 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 PDCD6IPQ8WUM4 868 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CAPSLQ8WWF8 208 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 C3orf49Q96BT1 292 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TAMM41Q96BW9 452 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 VPS39Q96JC1 886 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RADILQ96JH8 1075 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CCDC43Q96MW1 224 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 CMTM3Q96MX0 182 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF641Q96N77 438 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 INPP4AQ96PE3 977 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 BTBD9Q96Q07 612 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 KRT12Q99456 494 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RIT2Q99578 217 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 EIF2AK1Q9BQI3 630 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 UBAC1Q9BSL1 405 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SCNM1Q9BWG6 230 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TEKT3Q9BXF9 490 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 POLR1EQ9GZS1 481 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 RBM38Q9H0Z9 239 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 ABCG8Q9H221 673 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 LHX5Q9H2C1 402 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SEPSECSQ9HD40 501 aaKnown RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SAYSD1Q9NPB0 183 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC35C2Q9NQQ7 365 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 TMEM184CQ9NVA4 438 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 PARVAQ9NVD7 372 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 WWOXQ9NZC7 414 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 COX16Q9P0S2 106 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 COG5Q9UP83 839 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 ERVK-19Q9WJR5 959 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 MTMR6Q9Y217 621 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 DTX4Q9Y2E6 619 aa4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 KLF2Q9Y5W3 355 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P13-201ENST00000511263 MED23Q9ULK4 1368 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 KIR2DS5A0A0G2JLQ3 304 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 A0A1B0GTQ1 180 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 A0A1W2PRG6 482 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SYNDIG1LA6NDD5 238 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF98A6NK75 572 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SMIM23A6NLE4 172 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SLC38A8A6NNN8 435 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 HSBP1L1C9JCN9 74 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 KIR2DS3K7RE56 304 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ACKR2O00590 384 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRIM38O00635 465 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TXNDC9O14530 226 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TOR1AO14656 332 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 VILLO15195 856 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 RIPK2O43353 540 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SNX3O60493 162 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 UGDHO60701 494 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 PTP4A3O75365 173 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 SULT1C4O75897 302 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZWINTO95229 277 aa4.54□□□□□ -1.68
HMGB3P13-201ENST00000511263 TRIM16O95361 564 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms