RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TIMM50Q3ZCQ8 353 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 C5orf22Q49AR2 442 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 IQCCQ4KMZ1 466 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 ZNF551Q7Z340 670 aaPredicted RBP17.27■□□□□ 0.35
NUP54-205ENST00000507257 VN1R5Q7Z5H4 357 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 NLGN4XQ8N0W4 816 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 C9orf43Q8TAL5 461 aaPredicted RBP17.27■□□□□ 0.35
NUP54-205ENST00000507257 ZNF675Q8TD23 568 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 SUSD3Q96L08 255 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 RPRD1AQ96P16 312 aaPredicted RBP17.27■□□□□ 0.35
NUP54-205ENST00000507257 MAGEH1Q9H213 219 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 C3orf14Q9HBI5 128 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 ZFP14Q9HCL3 533 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 OLA1Q9NTK5 396 aaKnown RBP17.27■□□□□ 0.35
NUP54-205ENST00000507257 ELOVL2Q9NXB9 296 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 PCDHGB2Q9Y5G2 931 aa17.27■□□□□ 0.35
NUP54-205ENST00000507257 TTC3P53804 2025 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 KDELR2P33947 212 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 PIK3CGP48736 1102 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 HSPA7P48741 367 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 RING1Q06587 406 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 DMPKQ09013 629 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 VEZF1Q14119 521 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 GRB14Q14449 540 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 ERAP2Q6P179 960 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 DLK2Q6UY11 383 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 BEND7Q8N7W2 519 aaPredicted RBP17.26■□□□□ 0.35
NUP54-205ENST00000507257 ST13P5Q8NFI4 369 aaPredicted RBP17.26■□□□□ 0.35
NUP54-205ENST00000507257 DHRS1Q96LJ7 313 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 C8orf48Q96LL4 319 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 UROC1Q96N76 676 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 INPP5KQ9BT40 448 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 SPATA9Q9BWV2 254 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 FAM126AQ9BYI3 521 aaPredicted RBP17.26■□□□□ 0.35
NUP54-205ENST00000507257 NSUN3Q9H649 340 aaKnown RBP17.26■□□□□ 0.35
NUP54-205ENST00000507257 SLA2Q9H6Q3 261 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 TBC1D14Q9P2M4 693 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 ANGPTL3Q9Y5C1 460 aa17.26■□□□□ 0.35
NUP54-205ENST00000507257 CENPXA8MT69 81 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 NDUFB5O43674 189 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 AOC2O75106 756 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 GPX2P18283 190 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 RPS3P23396 243 aaKnown RBP eCLIP17.25■□□□□ 0.35
NUP54-205ENST00000507257 C21orf33P30042 268 aaPredicted RBP17.25■□□□□ 0.35
NUP54-205ENST00000507257 GRK5P34947 590 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 SLC19A1P41440 591 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 RPS5P46782 204 aaKnown RBP17.25■□□□□ 0.35
NUP54-205ENST00000507257 RGS6P49758 472 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 RGS4P49798 205 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■□□□□ 10.7
NUP54-205ENST00000507257 ZFP69Q49AA0 526 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 RNF19BQ6ZMZ0 732 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 ZNF367Q7RTV3 350 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 GPR155Q7Z3F1 870 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 ZZZ3Q8IYH5 903 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 PPP1R13LQ8WUF5 828 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 GGHQ92820 318 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 LPPQ93052 612 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 UBE2FQ969M7 185 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 SIRT5Q9NXA8 310 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 CRNNQ9UBG3 495 aaPredicted RBP17.25■□□□□ 0.35
NUP54-205ENST00000507257 DKK3Q9UBP4 350 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
NUP54-205ENST00000507257 ADORA3P0DMS8 318 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 MAPK1P28482 360 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 MTAPQ13126 283 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 LRRC26Q2I0M4 334 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 ZRANB3Q5FWF4 1079 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 DOK6Q6PKX4 331 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.25■□□□□ 0.35
NUP54-205ENST00000507257 CERS6Q6ZMG9 384 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 DENND6BQ8NEG7 585 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 FUBP3Q96I24 572 aaKnown RBP eCLIP17.25■□□□□ 0.35
NUP54-205ENST00000507257 ST6GAL2Q96JF0 529 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 OR2A14Q96R47 310 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 GDF15Q99988 308 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 REXO4Q9GZR2 422 aaKnown RBP17.25■□□□□ 0.35
NUP54-205ENST00000507257 RDH14Q9HBH5 336 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 FARSBQ9NSD9 589 aaKnown RBP17.25■□□□□ 0.35
NUP54-205ENST00000507257 ST3GAL5Q9UNP4 418 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 BTBD3Q9Y2F9 522 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 PCDHGB3Q9Y5G1 929 aa17.25■□□□□ 0.35
NUP54-205ENST00000507257 NOTOA8MTQ0 251 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 A8MVJ9 347 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 H3BQ06 376 aaPredicted RBP17.24■□□□□ 0.35
NUP54-205ENST00000507257 RFXANKO14593 260 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 STX7O15400 261 aaKnown RBP17.24■□□□□ 0.35
NUP54-205ENST00000507257 TLL1O43897 1013 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 ZNF623O75123 536 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 KCNK5O95279 499 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 KRT6AP02538 564 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 KRT6BP04259 564 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 ITGA2P17301 1181 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 PTX3P26022 381 aaPredicted RBP17.24■□□□□ 0.35
NUP54-205ENST00000507257 MRPS6P82932 125 aaKnown RBP17.24■□□□□ 0.35
NUP54-205ENST00000507257 CACNG1Q06432 222 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 EFEMP1Q12805 493 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 DEPDC4Q8N2C3 294 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 OR10Q1Q8NGQ4 319 aa17.24■□□□□ 0.35
NUP54-205ENST00000507257 NELL1Q92832 810 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms