RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 ZNF876PQ49A33 203 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 SPECC1Q5M775 1068 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 SFMBT2Q5VUG0 894 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNF704Q6ZNC4 412 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 C15orf39Q6ZRI6 1047 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 GSTA5Q7RTV2 222 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 OR14L1PQ8NHC6 308 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 NFKBIDQ8NI38 313 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 ST8SIA4Q92187 359 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 LGALS12Q96DT0 336 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 STAMBPL1Q96FJ0 436 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 ZNF558Q96NG5 402 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 TMEM117Q9H0C3 514 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 LRMDAQ9H2I8 198 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 AZI2Q9H6S1 392 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 CWH43Q9H720 699 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 KAT14Q9H8E8 782 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 TBC1D17Q9HA65 648 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 LTB4R2Q9NPC1 389 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 RRAGDQ9NQL2 400 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 PCDHB16Q9NRJ7 776 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 LUZP4Q9P127 313 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 CGNQ9P2M7 1197 aaKnown RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 GMEB2Q9UKD1 530 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 ANGPTL2Q9UKU9 493 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 RAB23Q9ULC3 237 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 SMC3Q9UQE7 1217 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 CAPN7Q9Y6W3 813 aa4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 FASNP49327 2511 aaKnown RBP4.53□□□□□ -1.68
HMGB3P5-201ENST00000428894 TTC41PQ6P2S7 1318 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 USP24Q9UPU5 2620 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 CNOT1A5YKK6 2376 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 SMIM1B2RUZ4 78 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 SLC30A4O14863 429 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 EIF3DO15371 548 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 PCDH7O60245 1069 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 LRP3O75074 770 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 PYGLP06737 847 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 DCNP07585 359 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 INHBAP08476 426 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 XBP1P17861 261 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 ABCD3P28288 659 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 APOBEC1P41238 236 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 ARCN1P48444 511 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 STARD6P59095 220 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 COG7P83436 770 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 TBX2Q13207 712 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 OLIG2Q13516 323 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 PTPN14Q15678 1187 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 MYLK3Q32MK0 819 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 MARCH8Q5T0T0 291 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 DCLRE1AQ6PJP8 1040 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 LRRC43Q8N309 656 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 SNRNP27Q8WVK2 155 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 SLC44A1Q8WWI5 657 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 PSPC1Q8WXF1 523 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 TMEM68Q96MH6 324 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 MRPL9Q9BYD2 267 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 EGLN1Q9GZT9 426 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 FAM49AQ9H0Q0 323 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 CPVLQ9H3G5 476 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 TFB2MQ9H5Q4 396 aaKnown RBP4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 JMJD4Q9H9V9 463 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 MKLN1Q9UL63 735 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 RPS6KL1Q9Y6S9 549 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 DENND4AQ7Z401 1863 aa4.52□□□□□ -1.69
HMGB3P5-201ENST00000428894 BAZ2BQ9UIF8 2168 aaKnown RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 MTCL1Q9Y4B5 1905 aaKnown RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 EIF3CLB5ME19 914 aaKnown RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 BLOC1S5-TXNDC5H3BN57 136 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 M0QZ24 198 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 CREB3O43889 395 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 PRKNO60260 465 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 CTSVO60911 334 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 IPO7O95373 1038 aaKnown RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 CAVIN2O95810 425 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZNF883P0CG24 379 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 HOXA13P31271 388 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 UBA7P41226 1012 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 SLC26A2P50443 739 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 GTF2A1P52655 376 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 CRYBB1P53674 252 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 SP4Q02446 784 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 RUNX1T1Q06455 604 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 MAD2L1Q13257 205 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 TMEM266Q2M3C6 531 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 MCMDC2Q4G0Z9 681 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 TSSK4Q6SA08 328 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 PLPPR4Q7Z2D5 763 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 SLC39A11Q8N1S5 342 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 STPG4Q8N801 248 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZNF485Q8NCK3 441 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 ZBTB44Q8NCP5 570 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 TM9SF4Q92544 642 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 TAF15Q92804 592 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 RRNAD1Q96FB5 475 aaKnown RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 C17orf77Q96MU5 243 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 CASD1Q96PB1 797 aa4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 NR1H4Q96RI1 486 aaPredicted RBP4.51□□□□□ -1.69
HMGB3P5-201ENST00000428894 NCAPGQ9BPX3 1015 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms