RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	DSG4	Q86SJ6	1040 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NOXA1	Q86UR1	476 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GALNT12	Q8IXK2	581 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BEND7	Q8N7W2	519 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR8J2	Q8NGG1	315 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CNIH3	Q8TBE1	160 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CD200R1	Q8TD46	325 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NDRG1	Q92597	394 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HTRA1	Q92743	480 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	EXT2	Q93063	718 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LINGO1	Q96FE5	620 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GAD1	Q99259	594 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GPR21	Q99679	349 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GTPBP2	Q9BX10	602 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CD244	Q9BZW8	370 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF556	Q9HAH1	456 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	THSD1	Q9NS62	852 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DDX28	Q9NUL7	540 aa	Known RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TBC1D14	Q9P2M4	693 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RBPJL	Q9UBG7	517 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	UBA2	Q9UBT2	640 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IKZF3	Q9UKT9	509 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	USP22	Q9UPT9	525 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MED16	Q9Y2X0	877 aa		11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	POLR3H	Q9Y535	204 aa	Predicted RBP	11.44	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MIA3	Q5JRA6	1907 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	UBA6	A0AVT1	1052 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CCDC182	A6NF36	153 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236		M0QZ92	97 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TOR1B	O14657	336 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PTGES	O14684	152 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TNFRSF10B	O14763	440 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	INPPL1	O15357	1258 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC16A5	O15375	505 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FFAR2	O15552	330 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	WBP4	O75554	376 aa	Known RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IL1A	P01583	271 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DDX5	P17844	614 aa	Known RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TSPAN8	P19075	237 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IL12RB1	P42701	662 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MAPK8	P45983	427 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	APLP1	P51693	650 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	AP2S1	P53680	142 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SOX4	Q06945	474 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC10A7	Q0GE19	358 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TNK1	Q13470	666 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KCNC3	Q14003	757 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	VGLL4	Q14135	290 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NKG7	Q16617	165 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GPR33	Q49SQ1	333 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SETMAR	Q53H47	684 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	COLEC12	Q5KU26	742 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CATSPERE	Q5SY80	951 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HACD4	Q5VWC8	232 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SIGIRR	Q6IA17	410 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF280D	Q6N043	979 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MZT2B	Q6NZ67	158 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LETMD1	Q6P1Q0	360 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	TMPRSS11A	Q6ZMR5	421 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CCDC81	Q6ZN84	652 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IDO2	Q6ZQW0	420 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RPS27L	Q71UM5	84 aa	Known RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GET4	Q7L5D6	327 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	GLT6D1	Q7Z4J2	308 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CAMKMT	Q7Z624	323 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	METTL3	Q86U44	580 aa	Known RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MSRB3	Q8IXL7	192 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RDH10	Q8IZV5	341 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC7A5P1	Q8MH63	180 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	VWA5B2	Q8N398	1253 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	STX19	Q8N4C7	294 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	LINC00471	Q8N535	108 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PSD4	Q8NDX1	1056 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	OR4F6	Q8NGB9	312 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SUN5	Q8TC36	379 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZFAND1	Q8TCF1	268 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	FRS2	Q8WU20	508 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	EDEM1	Q92611	657 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	HMCES	Q96FZ2	354 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SAMD11	Q96NU1	681 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PGLYRP2	Q96PD5	576 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SEMA3C	Q99985	751 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	DHRS9	Q9BPW9	319 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	ARHGAP39	Q9C0H5	1083 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	IPPK	Q9H8X2	491 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	C12orf10	Q9HB07	376 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	THUMPD1	Q9NXG2	353 aa	Known RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SLC25A37	Q9NYZ2	338 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	PDP1	Q9P0J1	537 aa	Predicted RBP	11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	KLF15	Q9UIH9	416 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	BTNL2	Q9UIR0	455 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NUP50	Q9UKX7	468 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	RAB23	Q9ULC3	237 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	MAU2	Q9Y6X3	613 aa		11.43	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	SHROOM3	Q8TF72	1996 aa		11.42	□□□□□ -0.58
U2AF1L4-221	ENST00000601236	NPEPPSL1	A6NEC2	478 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms