RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 FERD3LQ96RJ6 166 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 SYTL2Q9HCH5 934 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 LHX9Q9NQ69 397 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 GALPQ9UBC7 116 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.14■□□□□ 0.01
USB1-208ENST00000563207 V9GYY5 206 aaPredicted RBP15.14■□□□□ 0.01
USB1-208ENST00000563207 CDC14CA4D256 554 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 PIAS1O75925 651 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 DNAJB5O75953 348 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 MATN4O95460 622 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 INHBAP08476 426 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 F7P08709 466 aaPredicted RBP15.13■□□□□ 0.01
USB1-208ENST00000563207 IL2P60568 153 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 DNASE1L3Q13609 305 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 SLC29A2Q14542 456 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 ACSBG2Q5FVE4 666 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 TAOK1Q7L7X3 1001 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 GIMAP7Q8NHV1 300 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 C9orf43Q8TAL5 461 aaPredicted RBP15.13■□□□□ 0.01
USB1-208ENST00000563207 AENQ8WTP8 325 aaKnown RBP15.13■□□□□ 0.01
USB1-208ENST00000563207 SKA2Q8WVK7 121 aaPredicted RBP15.13■□□□□ 0.01
USB1-208ENST00000563207 CAVIN3Q969G5 261 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 FAM136AQ96C01 138 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 PDLIM5Q96HC4 596 aaKnown RBP15.13■□□□□ 0.01
USB1-208ENST00000563207 EFHD1Q9BUP0 239 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 KLHL25Q9H0H3 589 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 TFB2MQ9H5Q4 396 aaKnown RBP15.13■□□□□ 0.01
USB1-208ENST00000563207 PPCSQ9HAB8 311 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 FGF21Q9NSA1 209 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 ZNF180Q9UJW8 692 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 RARRES3Q9UL19 164 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 PADI1Q9ULC6 663 aa15.13■□□□□ 0.01
USB1-208ENST00000563207 PCSK5Q92824 1860 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 EXOC1LA0A1B0GW35 172 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 PIPSLA2A3N6 862 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 TLCD2A6NGC4 264 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 SLC9B1P1A6NJY1 282 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 BTN3A3O00478 584 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 CREG1O75629 220 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 PDGFAP04085 211 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 SPTBP11277 2137 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 STMN1P16949 149 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 MSH2P43246 934 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 ABRQ12979 859 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 USP10Q14694 798 aaKnown RBP15.12■□□□□ 0.01
USB1-208ENST00000563207 LGSNQ5TDP6 509 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 PAQR3Q6TCH7 311 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 DCUN1D3Q8IWE4 304 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 D2HGDHQ8N465 521 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 NKAPQ8N5F7 415 aaKnown RBP15.12■□□□□ 0.01
USB1-208ENST00000563207 UBLCP1Q8WVY7 318 aaPredicted RBP15.12■□□□□ 0.01
USB1-208ENST00000563207 ANKRD7Q92527 254 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 ZNF501Q96CX3 271 aaPredicted RBP15.12■□□□□ 0.01
USB1-208ENST00000563207 PAFAH2Q99487 392 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 SLC30A3Q99726 388 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 OLFM1Q99784 485 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 TRIM55Q9BYV6 548 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 ACTL8Q9H568 366 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 XKR8Q9H6D3 395 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 PDE7BQ9NP56 450 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 RRAGDQ9NQL2 400 aaPredicted RBP15.12■□□□□ 0.01
USB1-208ENST00000563207 TUBD1Q9UJT1 453 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 SLC39A10Q9ULF5 831 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 TP53TG5Q9Y2B4 290 aa15.12■□□□□ 0.01
USB1-208ENST00000563207 MTO1Q9Y2Z2 717 aaKnown RBP15.12■□□□□ 0.01
USB1-208ENST00000563207 PSIP1O75475 530 aaKnown RBP15.11■□□□□ 0.01
USB1-208ENST00000563207 KRT38O76015 456 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 CATP04040 527 aaKnown RBP15.11■□□□□ 0.01
USB1-208ENST00000563207 CCNYL3P0C7X3 344 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 PVRP15151 417 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 CRABP2P29373 138 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 TAS2R39P59534 338 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 HSD11B2P80365 405 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 MC1RQ01726 317 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 CHAF1BQ13112 559 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 GPS2Q13227 327 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 PRKG2Q13237 762 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 EFTUD2Q15029 972 aaKnown RBP eCLIP15.11■□□□□ 0.01
USB1-208ENST00000563207 CYHR1Q6ZMK1 362 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 OOSP2Q86WS3 158 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 CPNE9Q8IYJ1 553 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 MYO1HQ8N1T3 1032 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 RAB42Q8N4Z0 105 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 FBXO15Q8NCQ5 510 aaPredicted RBP15.11■□□□□ 0.01
USB1-208ENST00000563207 EEF1AKMT1Q8WVE0 214 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 ASB11Q8WXH4 323 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 RAD51AP1Q96B01 352 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 RAB11FIP5Q9BXF6 653 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 TWSG1Q9GZX9 223 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 EPB41L4BQ9H329 900 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 GPAMQ9HCL2 828 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 TLK1Q9UKI8 766 aa15.11■□□□□ 0.01
USB1-208ENST00000563207 FLNCQ14315 2725 aa15.1■□□□□ 0.01
USB1-208ENST00000563207 POC1B-GALNT4F8VUJ3 575 aa15.1■□□□□ 0.01
USB1-208ENST00000563207 GFYI3L273 518 aa15.1■□□□□ 0.01
USB1-208ENST00000563207 MATN2O00339 956 aa15.1■□□□□ 0.01
USB1-208ENST00000563207 SLC16A5O15375 505 aa15.1■□□□□ 0.01
USB1-208ENST00000563207 ZBTB14O43829 449 aa15.1■□□□□ 0.01
USB1-208ENST00000563207 FAM155BO75949 473 aa15.1■□□□□ 0.01
USB1-208ENST00000563207 C1orf105O95561 183 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms