RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RIDAP52758 137 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 LBX1P52954 281 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 LINC00315P59091 139 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ABCE1P61221 599 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 RPL7AP62424 266 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 MYL7Q01449 175 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ACY1Q03154 408 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 CKAP4Q07065 602 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 GOLGA8DPQ0D2H9 430 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 NIPAL4Q0D2K0 466 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 SGCGQ13326 291 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 MORC3Q14149 939 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 MELKQ14680 651 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 TMEM132DQ14C87 1099 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 RARS2Q5T160 578 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 INTS11Q5TA45 600 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 GARNL3Q5VVW2 1013 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 TMEM198Q66K66 360 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ACSM2BQ68CK6 577 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 LEMD1Q68G75 181 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 Q6P435 159 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 NUDT13Q86X67 352 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 RPAP2Q8IXW5 612 aaPredicted RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 CFAP206Q8IYR0 622 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 H1FOOQ8IZA3 346 aaPredicted RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 CNTROBQ8N137 903 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ARHGAP24Q8N264 748 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 AFAP1Q8N556 730 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ZNF561Q8N587 486 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 SPATA5Q8NB90 893 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 HJURPQ8NCD3 748 aaPredicted RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 TMEM116Q8NCL8 245 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 NPEPL1Q8NDH3 523 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 CCDC107Q8WV48 283 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 TRIM63Q969Q1 353 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ST6GALNAC6Q969X2 333 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 RNF125Q96EQ8 232 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 FAM218AQ96MZ4 157 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 DGAT2Q96PD7 388 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 GAD1Q99259 594 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 NCAPGQ9BPX3 1015 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 C16orf70Q9BSU1 422 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 LMF2Q9BU23 707 aaKnown RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 CHRDL1Q9BU40 450 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 LRRCC1Q9C099 1032 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 MTMR12Q9C0I1 747 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 FAM207AQ9NSI2 230 aaPredicted RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 CUTCQ9NTM9 273 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 STAU2Q9NUL3 570 aaKnown RBP eCLIP0.5□□□□□ -2.33
COPB1-212ENST00000534771 FRMD4AQ9P2Q2 1039 aaPredicted RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 B3GAT1Q9P2W7 334 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 RHCGQ9UBD6 479 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 IL17BQ9UHF5 180 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 DAPK2Q9UIK4 370 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 ZHX1Q9UKY1 873 aaPredicted RBP0.5□□□□□ -2.33
COPB1-212ENST00000534771 CLEC4EQ9ULY5 219 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 STUB1Q9UNE7 303 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 PCDHGA5Q9Y5G8 931 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 CYP46A1Q9Y6A2 500 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 SELENOKQ9Y6D0 94 aa0.5□□□□□ -2.33
COPB1-212ENST00000534771 CCDC196A0A1B0GTZ2 297 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 A0A1W2PQ67 120 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 SCAMP1O15126 338 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 VILLO15195 856 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 TGFB1I1O43294 461 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 LRP3O75074 770 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 KRT33AO76009 404 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 LYPD3O95274 346 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 APBB3O95704 486 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 WDPCPO95876 746 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 ASNSP08243 561 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 SPARCP09486 303 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 GIG44P09565 113 aaPredicted RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 MYOGP15173 224 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 MDKP21741 143 aaPredicted RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 ELAVL4P26378 380 aaKnown RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 MNDAP41218 407 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 KRTAP12-4P60329 112 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 VAMP2P63027 116 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 MECOMQ03112 1051 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 CEBPZQ03701 1054 aaKnown RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 TLE2Q04725 743 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 TRPC3Q13507 836 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 EIF4A2Q14240 407 aaKnown RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 KRT33BQ14525 404 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 EXT1Q16394 746 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 TIMM50Q3ZCQ8 353 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 HSP90AB2PQ58FF8 381 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 ARID3BQ8IVW6 561 aaPredicted RBP0.49□□□□□ -2.33
COPB1-212ENST00000534771 SLC37A3Q8NCC5 494 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 OR7A2PQ8NGA2 310 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 OR11H4Q8NGC9 324 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 OR4D10Q8NGI6 311 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 OR4Q3Q8NH05 313 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 MOSPD2Q8NHP6 518 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 FLVCR1-AS1Q8TAF5 88 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 KIAA1524Q8TCG1 905 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 MORC4Q8TE76 937 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 ITLN1Q8WWA0 313 aa0.49□□□□□ -2.33
COPB1-212ENST00000534771 C2orf48Q96LS8 159 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms