RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 SAMD15Q9P1V8 674 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 WHRNQ9P202 907 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 GULP1Q9UBP9 304 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 REV1Q9UBZ9 1251 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 TBC1D29Q9UFV1 150 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 ANAPC5Q9UJX4 755 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 KCNK6Q9Y257 313 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 LRCH1Q9Y2L9 728 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 FAM169AQ9Y6X4 670 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 CEP250Q9BV73 2442 aa6.13□□□□□ -1.43
ATPAF1-209ENST00000529214 COL5A1P20908 1838 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TP53BP1Q12888 1972 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 SCN8AQ9UQD0 1980 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TRBV23OR9-2A0A075B6M9 112 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 IQANK1A0A1B0GTG1 560 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 ZCWPW2A0A1B0GU75 182 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 CPED1A4D0V7 1026 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MGAT4DA6NG13 374 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 SLC22A31A6NKX4 558 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 OR5K4A6NMS3 321 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 A8MVJ9 347 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 STMND1H3BQB6 276 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TERTO14746 1132 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 NVLO15381 856 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 NUDT21O43809 227 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TSC22D2O75157 780 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 USP1O94782 785 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 AP2A2O94973 939 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 EML2O95834 649 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MT-ND3P03897 115 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 POLBP06746 335 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 ADRB1P08588 477 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 RHOXF2BP0C7M4 288 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 F3P13726 295 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PNLIPP16233 465 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 VCLP18206 1134 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PAMP19021 973 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 CAPN3P20807 821 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 IDSP22304 550 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 GPC1P35052 558 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PPARGP37231 505 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MAN2A2P49641 1150 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 HYAL2Q12891 473 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PRKG2Q13237 762 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 SSPNQ14714 243 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 STK11Q15831 433 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 INSCQ1MX18 579 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MAJINQ3KP22 176 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 BCL7AQ4VC05 210 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 C14orf28Q4W4Y0 310 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 ARSJQ5FYB0 599 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 METRNLQ641Q3 311 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 KIAA0930Q6ICG6 404 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 GUSBP11Q6P575 273 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TLDC1Q6P9B6 456 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 CRTC3Q6UUV7 619 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 DET1Q7L5Y6 550 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TRAPPC5Q8IUR0 188 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 FAM20CQ8IXL6 584 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 SYTL1Q8IYJ3 562 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PDIK1LQ8N165 341 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 SFRP1Q8N474 314 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 ARL14Q8N4G2 192 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MMGT1Q8N4V1 131 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 CLDN19Q8N6F1 224 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 BEND7Q8N7W2 519 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TMEM102Q8N9M5 508 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 LRRN4CLQ8ND94 238 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TOR1AIP2Q8NFQ8 470 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 GPR150Q8NGU9 434 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 OR2L2Q8NH16 312 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 IFI44Q8TCB0 444 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 STK35Q8TDR2 534 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 NAT14Q8WUY8 206 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 LRRC39Q96DD0 335 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PWWP2AQ96N64 755 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 EBNA1BP2Q99848 306 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 RHOXF2Q9BQY4 288 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 CCM2Q9BSQ5 444 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 NAT9Q9BTE0 207 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 GRIP2Q9C0E4 1043 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 WDR12Q9GZL7 423 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 RAB17Q9H0T7 212 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PRDM8Q9NQV8 689 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 CATSPERZQ9NTU4 200 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 GRHL1Q9NZI5 618 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MARCH4Q9P2E8 410 aaPredicted RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 LRIT1Q9P2V4 623 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MALT1Q9UDY8 824 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 WASF3Q9UPY6 502 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 DNAJC16Q9Y2G8 782 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 GPR52Q9Y2T5 361 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 UTP11Q9Y3A2 253 aaKnown RBP6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 MAD1L1Q9Y6D9 718 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 TEX264Q9Y6I9 313 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 PRSS21Q9Y6M0 314 aa6.12□□□□□ -1.43
ATPAF1-209ENST00000529214 LRP4O75096 1905 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 KIR2DS5A0A0G2JLQ3 304 aa6.11□□□□□ -1.43
ATPAF1-209ENST00000529214 A0A0G2JNG1 304 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms