RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 OR10S1Q8NGN2 331 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 OR8K5Q8NH50 307 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 OR14L1PQ8NHC6 308 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 SMC6Q96SB8 1091 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 NAA11Q9BSU3 229 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 MMTAG2Q9BU76 263 aaKnown RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 NUP85Q9BW27 656 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 C8orf33Q9H7E9 229 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 MVB12BQ9H7P6 319 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 COPS7BQ9H9Q2 264 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 EPB41L5Q9HCM4 733 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 NYAP2Q9P242 653 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 WDR35Q9P2L0 1181 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 STK39Q9UEW8 545 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 UTS2RQ9UKP6 389 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 WBP11Q9Y2W2 641 aaKnown RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 NFE2L3Q9Y4A8 694 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 SNX5Q9Y5X3 404 aa4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.63□□□□□ -1.67
HMGB1P23-201ENST00000518743 HELZP42694 1942 aaKnown RBP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 KNL1Q8NG31 2342 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 EDDM13A0A1B0GTR0 161 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 ARHGEF37A1IGU5 675 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 SMTNL1A8MU46 457 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 KLK8O60259 260 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 UGDHO60701 494 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 MOSPD3O75425 235 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 PSMD10O75832 226 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 SFTPCP11686 197 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 EEF1B2P24534 225 aaKnown RBP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 ATP5F1P24539 256 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 CALRP27797 417 aaKnown RBP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 GLUD2P49448 558 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 CLCN3P51790 818 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 CLDN6P56747 220 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 GHRHRQ02643 423 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 GRSF1Q12849 480 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 GRIK2Q13002 908 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 PKP1Q13835 747 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 IL11RAQ14626 422 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 MORF4L2Q15014 288 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 HYAL4Q2M3T9 481 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 SOWAHAQ2M3V2 549 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 SGO1Q5FBB7 561 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 CLLU1OSQ5K130 101 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 ENTPD8Q5MY95 495 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 FHL5Q5TD97 284 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 PQLC2Q6ZP29 291 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 QSOX2Q6ZRP7 698 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 MFSD6Q6ZSS7 791 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 DPPA4Q7L190 304 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 DNAJB7Q7Z6W7 309 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 VRK3Q8IV63 474 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 MFN1Q8IWA4 741 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLC35F3Q8IY50 421 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCDC13Q8IYE1 715 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 IQUBQ8NA54 791 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 ENGASEQ8NFI3 743 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLC35F5Q8WV83 523 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 ATL1Q8WXF7 558 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 FER1L6-AS2Q96M78 137 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 ACOX2Q99424 681 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 B3GNT4Q9C0J1 378 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 TKTL2Q9H0I9 626 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 OPA3Q9H6K4 179 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 SERGEFQ9UGK8 458 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 LEF1Q9UJU2 399 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 DBNLQ9UJU6 430 aaKnown RBP4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 ABCB11O95342 1321 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 MYH7P12883 1935 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 PCDH15Q96QU1 1955 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 LRRK1Q38SD2 2015 aa4.62□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRIM64A6NGJ6 449 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRIM64BA6NI03 449 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 PRAMEF11O60813 436 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 SIX3O95343 332 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 TGDSO95455 350 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 TRUB2O95900 331 aaKnown RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 KLKB1P03952 638 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CBSLP0DN79 551 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 SRCP12931 536 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 DCTDP32321 178 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 PCGF2P35227 344 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CBSP35520 551 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 ME1P48163 572 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLC11A1P49279 550 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CAPZA1P52907 286 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CDH12P55289 794 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 SLC10A2Q12908 348 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 RALGDSQ12967 914 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 FAM78AQ5JUQ0 283 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 CCDC158Q5M9N0 1113 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 VITQ6UXI7 678 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 HAUS6Q7Z4H7 955 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 AMIGO2Q86SJ2 522 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 ZSCAN30Q86W11 494 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 RALGPS2Q86X27 583 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 FAM217AQ8IXS0 508 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 DEFB119Q8N690 84 aa4.61□□□□□ -1.67
HMGB1P23-201ENST00000518743 HORMAD2Q8N7B1 307 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms