RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 C12orf65Q9H3J6 166 aaKnown RBP14.45□□□□□ -0.1
NUP54-213ENST00000513352 CNOT10Q9H9A5 744 aaKnown RBP14.45□□□□□ -0.1
NUP54-213ENST00000513352 KCNK9Q9NPC2 374 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 SOHLH2Q9NX45 425 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 EPHA6Q9UF33 1036 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 CLCA2Q9UQC9 943 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 PCDHB11Q9Y5F2 797 aa14.45□□□□□ -0.1
NUP54-213ENST00000513352 A0A0J9YY10 115 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 A0A1W2PPV9 198 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 AGPSO00116 658 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 DKK1O94907 266 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CCNDBP1O95273 360 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 C9P02748 559 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 THRAP10827 490 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 PVRP15151 417 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CREB1P16220 341 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CCND1P24385 295 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CMPK1P30085 196 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 AGTR2P50052 363 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 FOXC1Q12948 553 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 PTCHD3Q3KNS1 767 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CCDC153Q494R4 210 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CDKL4Q5MAI5 379 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CDCP2Q5VXM1 449 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 ZNF574Q6ZN55 896 aaPredicted RBP14.44□□□□□ -0.1
NUP54-213ENST00000513352 SH2D5Q6ZV89 423 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 DGLUCYQ7Z3D6 616 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 RAB44Q7Z6P3 723 aaPredicted RBP14.44□□□□□ -0.1
NUP54-213ENST00000513352 EXOC3L1Q86VI1 746 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 SLITRK4Q8IW52 837 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 CHCHD4Q8N4Q1 142 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 PTGR2Q8N8N7 351 aaPredicted RBP14.44□□□□□ -0.1
NUP54-213ENST00000513352 SNX31Q8N9S9 440 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 ADAMTS14Q8WXS8 1223 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 ESAMQ96AP7 390 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 PHF21BQ96EK2 531 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 TMEM79Q9BSE2 394 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 STRADBQ9C0K7 418 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 MRPS30Q9NP92 439 aaKnown RBP14.44□□□□□ -0.1
NUP54-213ENST00000513352 MKS1Q9NXB0 559 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 AKAP7Q9P0M2 348 aaPredicted RBP14.44□□□□□ -0.1
NUP54-213ENST00000513352 TMCO1Q9UM00 188 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 DYRK1BQ9Y463 629 aa14.44□□□□□ -0.1
NUP54-213ENST00000513352 IGHV5-51A0A0C4DH38 117 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 FAM149AA5PLN7 773 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 TAPBPO15533 448 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 MAP3K7O43318 606 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 ABCB7O75027 752 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 SASH3O75995 380 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 PROCP04070 461 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 MYL2P10916 166 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 MLLT3P42568 568 aaPredicted RBP14.43□□□□□ -0.1
NUP54-213ENST00000513352 GDF5P43026 501 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 ALDH18A1P54886 795 aaKnown RBP14.43□□□□□ -0.1
NUP54-213ENST00000513352 MAGOHP61326 146 aaKnown RBP14.43□□□□□ -0.1
NUP54-213ENST00000513352 SLC5A12Q1EHB4 618 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 ISXQ2M1V0 245 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 PRSS42Q7Z5A4 293 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 ADCK2Q7Z695 626 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 THOC6Q86W42 341 aaKnown RBP14.43□□□□□ -0.1
NUP54-213ENST00000513352 TMPRSS12Q86WS5 348 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 GALNT15Q8N3T1 639 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 OR56A3Q8NH54 315 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 FAM111AQ96PZ2 611 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 HAUS8Q9BT25 410 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 PCBD2Q9H0N5 130 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 C1GALT1Q9NS00 363 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 INTS7Q9NVH2 962 aaKnown RBP14.43□□□□□ -0.1
NUP54-213ENST00000513352 ZNF446Q9NWS9 450 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 SLC17A7Q9P2U7 560 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 MID2Q9UJV3 735 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 PTBP2Q9UKA9 531 aaKnown RBP14.43□□□□□ -0.1
NUP54-213ENST00000513352 EMCNQ9ULC0 261 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 KLHL20Q9Y2M5 609 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 ANGPTL3Q9Y5C1 460 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 COL27A1Q8IZC6 1860 aaPredicted RBP14.43□□□□□ -0.1
NUP54-213ENST00000513352 PTPRBP23467 1997 aa14.43□□□□□ -0.1
NUP54-213ENST00000513352 KIF26BQ2KJY2 2108 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 SLC9B1P1A6NJY1 282 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 TMX2-CTNND1H3BSU7 103 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 MAP2K7O14733 419 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 PLIN3O60664 434 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 STK16O75716 305 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 IPO13O94829 963 aaKnown RBP14.42□□□□□ -0.1
NUP54-213ENST00000513352 MTHFD2P13995 350 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 ST6GAL1P15907 406 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 MAGP20916 626 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 EEF1DP29692 281 aaKnown RBP14.42□□□□□ -0.1
NUP54-213ENST00000513352 CSTF2P33240 577 aaKnown RBP eCLIP14.42□□□□□ -0.1
NUP54-213ENST00000513352 LSSP48449 732 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 PDX1P52945 283 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 TARDBPQ13148 414 aaKnown RBP eCLIP14.42□□□□□ -0.1
NUP54-213ENST00000513352 TRA2AQ13595 282 aaKnown RBP eCLIP14.42□□□□□ -0.1
NUP54-213ENST00000513352 SETDB1Q15047 1291 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 AGBL2Q5U5Z8 902 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 KIAA1614Q5VZ46 1190 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 ICE2Q659A1 982 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 FOXR1Q6PIV2 292 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 C17orf64Q86WR6 236 aa14.42□□□□□ -0.1
NUP54-213ENST00000513352 FAM129CQ86XR2 697 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms