RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 STARD3Q14849 445 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 AASDHQ4L235 1098 aaPredicted RBP12.04□□□□□ -0.48
USP11-206ENST00000469080 CRTC3Q6UUV7 619 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 PHC2Q8IXK0 858 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 CHST14Q8NCH0 376 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 PJA1Q8NG27 643 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 S100ZQ8WXG8 99 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 TSSK3Q96PN8 268 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 TREX1Q9NSU2 369 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 IKZF3Q9UKT9 509 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 NOSIPQ9Y314 301 aaKnown RBP12.04□□□□□ -0.48
USP11-206ENST00000469080 WASH3PC4AMC7 463 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 SEC22BO75396 215 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 CDK14O94921 469 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 PGRP06401 933 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 SNRPB2P08579 225 aaKnown RBP12.04□□□□□ -0.48
USP11-206ENST00000469080 ZNF37AP17032 561 aaPredicted RBP12.04□□□□□ -0.48
USP11-206ENST00000469080 NNMTP40261 264 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 HTR6P50406 440 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 STC1P52823 247 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 LMAN2Q12907 356 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 BNIP2Q12982 314 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 MANEALQ5VSG8 457 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 GAREM2Q75VX8 874 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 C11orf96Q7Z7L8 435 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 GTF2H4Q92759 462 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 APBB2Q92870 758 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 TRIM15Q9C019 465 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 TMEM9Q9P0T7 183 aa12.04□□□□□ -0.48
USP11-206ENST00000469080 POLR3HQ9Y535 204 aaPredicted RBP12.04□□□□□ -0.48
USP11-206ENST00000469080 ANTXRLA6NF34 631 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 LRRC72A6NJI9 287 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 HNF4AP41235 474 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 PLCL1Q15111 1095 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 UNC50Q53HI1 259 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 FAM180BQ6P0A1 224 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 AFTPHQ6ULP2 937 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 ADGRG5Q8IZF4 528 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 SIMC1Q8NDZ2 872 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 MARC2Q969Z3 335 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 SH3KBP1Q96B97 665 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 C1QTNF1Q9BXJ1 281 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 CPNE5Q9HCH3 593 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 LCHNA4D1U4 455 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 H0YC42 278 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 LINC01387J3KSC0 135 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 PEX11BO96011 259 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 STATHP02808 62 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 SOD2P04179 222 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 HMGA1P17096 107 aaKnown RBP12.03□□□□□ -0.48
USP11-206ENST00000469080 VIPR2P41587 438 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 PPP3CCP48454 512 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 MRPL28Q13084 256 aaKnown RBP12.03□□□□□ -0.48
USP11-206ENST00000469080 STX5Q13190 355 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 DUSP7Q16829 419 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 LY6G5CQ5SRR4 150 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 AMIGO1Q86WK6 493 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 PARP8Q8N3A8 854 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 GPR156Q8NFN8 814 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 ZNF597Q96LX8 424 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 DOK1Q99704 481 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 SPOCK3Q9BQ16 436 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 CDADC1Q9BWV3 514 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 MFSD1Q9H3U5 465 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 NUP50Q9UKX7 468 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 NEU3Q9UQ49 428 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 CFAP20Q9Y6A4 193 aaKnown RBP12.03□□□□□ -0.48
USP11-206ENST00000469080 U3KQV3 271 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 A0A0X1KG70 313 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 I3L521 148 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 PRMT5O14744 637 aaPredicted RBP12.03□□□□□ -0.48
USP11-206ENST00000469080 KCNK2O95069 426 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 NTRK1P04629 796 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 CLTBP09497 229 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 NUDT1P36639 197 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 MAGEA11P43364 429 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 MAPKAPK2P49137 400 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 ETV1P50549 477 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 UFM1P61960 85 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 ACAP2Q15057 778 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 ACOX1Q15067 660 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 ERAP2Q6P179 960 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 DPY19L3Q6ZPD9 716 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 CLYBLQ8N0X4 340 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 FBXO30Q8TB52 745 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 FAM110BQ8TC76 370 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 RAB2BQ8WUD1 216 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 AARSD1Q9BTE6 412 aaKnown RBP12.03□□□□□ -0.48
USP11-206ENST00000469080 KCNN2Q9H2S1 579 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 SOX17Q9H6I2 414 aaPredicted RBP12.03□□□□□ -0.48
USP11-206ENST00000469080 IPPKQ9H8X2 491 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 SLAMF8Q9P0V8 285 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 GMEB2Q9UKD1 530 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 NDUFAF1Q9Y375 327 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 DNAJC15Q9Y5T4 150 aa12.03□□□□□ -0.48
USP11-206ENST00000469080 MICAL3Q7RTP6 2002 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 TRAV19A0A0A6YYK7 116 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 OR5K4A6NMS3 321 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 GBAP04062 536 aa12.02□□□□□ -0.48
USP11-206ENST00000469080 SPNP16150 400 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms