RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PLCL1Q15111 1095 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 KLHL38Q2WGJ6 581 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 FAM153CQ494X1 144 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 PWWP2BQ6NUJ5 590 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 ATG14Q6ZNE5 492 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 NEK10Q6ZWH5 1172 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 ESX1Q8N693 406 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 PPM1NQ8N819 430 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 ZDHHC12Q96GR4 267 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 SLC41A2Q96JW4 573 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 RBBP8Q99708 897 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 RAB33BQ9H082 229 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 TRMT6Q9UJA5 497 aaKnown RBP15.17■□□□□ 0.02
USB1-208ENST00000563207 MED16Q9Y2X0 877 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 PSAT1Q9Y617 370 aa15.17■□□□□ 0.02
USB1-208ENST00000563207 OR5K3A6NET4 321 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 RIPK2O43353 540 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 KDM1AO60341 852 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 RGS4P49798 205 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 VSNL1P62760 191 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 TLE1Q04724 770 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 TUBB3Q13509 450 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 KRT33BQ14525 404 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 IL11RAQ14626 422 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 BRD3Q15059 726 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 GPR19Q15760 415 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 HECTD2Q5U5R9 776 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 PRAMEF17Q5VTA0 474 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 EMBQ6PCB8 327 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 UNC5DQ6UXZ4 953 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 TBC1D21Q8IYX1 336 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 GPATCH11Q8N954 259 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 CT55Q8WUE5 264 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 ABHD17AQ96GS6 310 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 VPS39Q96JC1 886 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 FOPNLQ96NB1 174 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 GPR21Q99679 349 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 ADNPQ9H2P0 1102 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 TRIT1Q9H3H1 467 aaKnown RBP15.16■□□□□ 0.02
USB1-208ENST00000563207 HRASLS2Q9NWW9 162 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 SEMA5BQ9P283 1151 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 SLC17A6Q9P2U8 582 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 POLG2Q9UHN1 485 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 SLC24A2Q9UI40 661 aa15.16■□□□□ 0.02
USB1-208ENST00000563207 TNRC6AQ8NDV7 1962 aaKnown RBP15.15■□□□□ 0.02
USB1-208ENST00000563207 OR6C74A6NCV1 312 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 SFTPCP11686 197 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 FDXRP22570 491 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 CSRP3P50461 194 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 KPNA2P52292 529 aaKnown RBP15.15■□□□□ 0.02
USB1-208ENST00000563207 RPS18P62269 152 aaKnown RBP15.15■□□□□ 0.02
USB1-208ENST00000563207 POU4F1Q01851 419 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 MAP7Q14244 749 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 IGFBP7Q16270 282 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 RBM20Q5T481 1227 aaKnown RBP15.15■□□□□ 0.02
USB1-208ENST00000563207 FAM69BQ5VUD6 431 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 PPP1R3BQ86XI6 285 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 SIDT2Q8NBJ9 832 aaKnown RBP15.15■□□□□ 0.02
USB1-208ENST00000563207 SLC38A9Q8NBW4 561 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 OR4E2Q8NGC2 313 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 OR5K2Q8NHB8 316 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 CD200R1Q8TD46 325 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 MAGEC3Q8TD91 643 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 TSPAN17Q96FV3 270 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 NDNQ99608 321 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 GPR22Q99680 433 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 CCDC77Q9BR77 488 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 PARD6BQ9BYG5 372 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 EPN3Q9H201 632 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 KIR3DX1Q9H7L2 352 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 POPDC3Q9HBV1 291 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 FETUBQ9UGM5 382 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 RAB21Q9UL25 225 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 ASF1AQ9Y294 204 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 KCNMB2Q9Y691 235 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 IKBKGQ9Y6K9 419 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 RELNP78509 3460 aa15.15■□□□□ 0.02
USB1-208ENST00000563207 FAM95CA0A1B0GW59 222 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 MPC1LP0DKB6 136 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 POLR2CP19387 275 aaPredicted RBP15.14■□□□□ 0.01
USB1-208ENST00000563207 CNTFP26441 200 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 CCNFP41002 786 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 SERPINB9P50453 376 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 SLC12A2P55011 1212 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 CDKN2DP55273 166 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 TIAL1Q01085 375 aaKnown RBP eCLIP15.14■□□□□ 0.01
USB1-208ENST00000563207 PDAP1Q13442 181 aaKnown RBP15.14■□□□□ 0.01
USB1-208ENST00000563207 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.14■□□□□ 0.01
USB1-208ENST00000563207 LCN10Q6JVE6 187 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 TTC23LQ6PF05 361 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 KLHL35Q6PF15 583 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 NAPRTQ6XQN6 538 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 CCDC91Q7Z6B0 441 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 VRK3Q8IV63 474 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 GSPT2Q8IYD1 628 aaKnown RBP15.14■□□□□ 0.01
USB1-208ENST00000563207 PHC3Q8NDX5 983 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 ACVR1CQ8NER5 493 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 APOBEC4Q8WW27 367 aaKnown RBP15.14■□□□□ 0.01
USB1-208ENST00000563207 SLC44A1Q8WWI5 657 aa15.14■□□□□ 0.01
USB1-208ENST00000563207 CATSPER2Q96P56 530 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms