RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 FAM189A2Q15884 450 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 REG3GQ6UW15 175 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 MAML2Q8IZL2 1156 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-209ENST00000488908 AFAP1Q8N556 730 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 OR5T2Q8NGG2 359 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 C1orf74Q96LT6 269 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 OR6C1Q96RD1 312 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 RPS6KC1Q96S38 1066 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 C16orf70Q9BSU1 422 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 NYXQ9GZU5 481 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 FAM207AQ9NSI2 230 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-209ENST00000488908 DAPK2Q9UIK4 370 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 ZHX1Q9UKY1 873 aaPredicted RBP1.88□□□□□ -2.11
CCDC93-209ENST00000488908 KCNE2Q9Y6J6 123 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 GON4LQ3T8J9 2241 aa1.88□□□□□ -2.11
CCDC93-209ENST00000488908 C2orf81A6NN90 581 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 ENO4A6NNW6 628 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 WDPCPO95876 746 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 C9P02748 559 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 DARSP14868 501 aaKnown RBP1.87□□□□□ -2.11
CCDC93-209ENST00000488908 RPL35AP18077 110 aaKnown RBP1.87□□□□□ -2.11
CCDC93-209ENST00000488908 Q1RN00 199 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 ODF4Q2M2E3 257 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 SPECC1Q5M775 1068 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 CYP26C1Q6V0L0 522 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 CFAP77Q6ZQR2 320 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 VASH2Q86V25 355 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 NPEPL1Q8NDH3 523 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 MOSPD2Q8NHP6 518 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 ETNPPLQ8TBG4 499 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 NSMAFQ92636 917 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 PERPQ96FX8 193 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 OR2A14Q96R47 310 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 NCAPGQ9BPX3 1015 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 LMF2Q9BU23 707 aaKnown RBP1.87□□□□□ -2.11
CCDC93-209ENST00000488908 KIFC3Q9BVG8 833 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 PAIP1Q9H074 479 aaKnown RBP1.87□□□□□ -2.11
CCDC93-209ENST00000488908 OSER1Q9NX31 292 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 GGA3Q9NZ52 723 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 LNPEPQ9UIQ6 1025 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 GTF3C4Q9UKN8 822 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 STUB1Q9UNE7 303 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 GRIP1Q9Y3R0 1128 aa1.87□□□□□ -2.11
CCDC93-209ENST00000488908 K7EQD1 137 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 SRPRAP08240 638 aaKnown RBP1.86□□□□□ -2.11
CCDC93-209ENST00000488908 HOXC4P09017 264 aaPredicted RBP1.86□□□□□ -2.11
CCDC93-209ENST00000488908 XBP1P17861 261 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 CSTF2P33240 577 aaKnown RBP eCLIP1.86□□□□□ -2.11
CCDC93-209ENST00000488908 DHODHQ02127 395 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 TAF10Q12962 218 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 SLC35D3Q5M8T2 416 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 ELFN2Q5R3F8 820 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 UGT3A1Q6NUS8 523 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 LEKR1Q6ZMV7 388 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 CATSPER3Q86XQ3 398 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 SCYL3Q8IZE3 742 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 ARHGAP24Q8N264 748 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 CSNK1G2-AS1Q8NCQ2 148 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 PAPD5Q8NDF8 572 aaKnown RBP1.86□□□□□ -2.11
CCDC93-209ENST00000488908 OR11H4Q8NGC9 324 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 OR5M8Q8NGP6 311 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 RAD9AQ99638 391 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 LPAR4Q99677 370 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 PLK3Q9H4B4 646 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 CHMP1AQ9HD42 196 aaPredicted RBP1.86□□□□□ -2.11
CCDC93-209ENST00000488908 TAS2R14Q9NYV8 317 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 EHD2Q9NZN4 543 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 ADAM22Q9P0K1 906 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 B3GAT1Q9P2W7 334 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 CMAHPQ9Y471 501 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 RALGAPA1Q6GYQ0 2036 aa1.86□□□□□ -2.11
CCDC93-209ENST00000488908 A0A1W2PQ72 361 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 G3V2L1 256 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 TEX28O15482 410 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 HS6ST1O60243 411 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 RSL1D1O76021 490 aaKnown RBP1.85□□□□□ -2.11
CCDC93-209ENST00000488908 EIF2S1P05198 315 aaKnown RBP1.85□□□□□ -2.11
CCDC93-209ENST00000488908 HSPA8P11142 646 aaKnown RBP1.85□□□□□ -2.11
CCDC93-209ENST00000488908 PTGER4P35408 488 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 MNDAP41218 407 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 IGLV3-21P80748 117 aaPredicted RBP1.85□□□□□ -2.11
CCDC93-209ENST00000488908 KRT33BQ14525 404 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 ZNF146Q15072 292 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 FAM98BQ52LJ0 330 aaKnown RBP1.85□□□□□ -2.11
CCDC93-209ENST00000488908 SPDYCQ5MJ68 293 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 C3P1Q6ZMU1 363 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 ADGRD2Q7Z7M1 963 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 OR10G7Q8NGN6 311 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 EXD1Q8NHP7 514 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 ARHGEF2Q92974 986 aaKnown RBP1.85□□□□□ -2.11
CCDC93-209ENST00000488908 FNDC11Q9BVV2 318 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 TMX4Q9H1E5 349 aaPredicted RBP1.85□□□□□ -2.11
CCDC93-209ENST00000488908 PDCL3Q9H2J4 239 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 MYOZ2Q9NPC6 264 aa1.85□□□□□ -2.11
CCDC93-209ENST00000488908 TRAFD1O14545 582 aaPredicted RBP1.84□□□□□ -2.11
CCDC93-209ENST00000488908 PIP5K1CO60331 668 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 PCP11498 1178 aaKnown RBP1.84□□□□□ -2.11
CCDC93-209ENST00000488908 ATP4BP51164 291 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 KRTAP10-10P60014 251 aa1.84□□□□□ -2.11
CCDC93-209ENST00000488908 GRAMD1BQ3KR37 738 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms