RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 HERC3Q15034 1050 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 INO80DQ53TQ3 878 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-218ENST00000482171 ZNF678Q5SXM1 525 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 FBXO46Q6PJ61 603 aaPredicted RBP11.05□□□□□ -0.64
SMPD4-218ENST00000482171 UGT2A3Q6UWM9 527 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 AHSA2Q719I0 299 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 BEND5Q7L4P6 421 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 NXPE1Q8N323 547 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 MAPK15Q8TD08 544 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 TOP1MTQ969P6 601 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 DMRTB1Q96MA1 342 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 KRT84Q9NSB2 600 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 DOCK1Q14185 1865 aa11.05□□□□□ -0.64
SMPD4-218ENST00000482171 LOXHD1Q8IVV2 1947 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 LOC110117498-PIK3R3F6TDL0 507 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 STATHP02808 62 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TFAP2AP05549 437 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TNNI3P19429 210 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 MAGEA6P43360 314 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 C1DQ13901 141 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CTC1Q2NKJ3 1217 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TBC1D25Q3MII6 688 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 BRAT1Q6PJG6 821 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CYP2U1Q7Z449 544 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PROSER1Q86XN7 944 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 HERVK_113Q902F9 699 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TCEAL4Q96EI5 215 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 MRM3Q9HC36 420 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CD320Q9NPF0 282 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 C1orf109Q9NX04 203 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 H2AFY2Q9P0M6 372 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 SUCOQ9UBS9 1254 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 ZNF221Q9UK13 617 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 RAB23Q9ULC3 237 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TMEM98Q9Y2Y6 226 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PMF1-BGLAPU3KQ54 211 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PIPSLA2A3N6 862 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TTC34A8MYJ7 566 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 RASGRP1O95267 797 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 AZGP1P25311 298 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 BDKRB1P46663 353 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 ANXA11P50995 505 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 UFM1P61960 85 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TRAP1Q12931 704 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 NCF4Q15080 339 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 ZNF57Q68EA5 555 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 KDELC1Q6UW63 502 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 RSPO2Q6UXX9 243 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PRR23CQ6ZRP0 262 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CYP4V2Q6ZWL3 525 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CHST14Q8NCH0 376 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 KBTBD8Q8NFY9 601 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 SLC47A1Q96FL8 570 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CCDC177Q9NQR7 707 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 IKZF3Q9UKT9 509 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CAPN14A8MX76 684 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 H3BNH8 94 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 BCKDKO14874 412 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 B4GALT3O60512 393 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 WBP4O75554 376 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TIMP1P01033 207 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CA3P07451 260 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CTSAP10619 480 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 ATP1B2P14415 290 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 SLC26A3P40879 764 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 ARPC4P59998 168 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 MS4A2Q01362 244 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 MED22Q15528 200 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TCAIMQ8N3R3 496 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 KCNJ9Q92806 393 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 ROPN1LQ96C74 230 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 NUS1Q96E22 293 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 DERL2Q9GZP9 239 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 EXD2Q9NVH0 621 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 TMCC2O75069 709 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CD1DP15813 335 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PORP16435 677 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 KRT20P35900 424 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 CTSOP43234 321 aaPredicted RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PLA2G16P53816 162 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 MANFP55145 182 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 RPS14P62263 151 aaKnown RBP11.04□□□□□ -0.64
SMPD4-218ENST00000482171 ERVK-8P63133 956 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 SLC8B1Q6J4K2 584 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PARGQ86W56 976 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 PIANPQ8IYJ0 282 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 C10orf53Q8N6V4 93 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 STARD8Q92502 1023 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 NACC2Q96BF6 587 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 MCMBPQ9BTE3 642 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 C8orf4Q9NR00 106 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 SPATA2Q9UM82 520 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 RNF11Q9Y3C5 154 aa11.04□□□□□ -0.64
SMPD4-218ENST00000482171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
SMPD4-218ENST00000482171 CLPXO76031 633 aa11.03□□□□□ -0.64
SMPD4-218ENST00000482171 TGFB1P01137 390 aa11.03□□□□□ -0.64
SMPD4-218ENST00000482171 GBAP04062 536 aa11.03□□□□□ -0.64
SMPD4-218ENST00000482171 C8GP07360 202 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms